Q5NI65_FRATT/14-0--GISPQGAQDQLSFITAYNLVGKPTNFQAVEMIY---PAEITANQD-AL-VCLSGASYQ CONSENSUS/80% phGls.uGshD.huhphuNhllGN..sssslEhshh..s.phphtts.sh.hulsGu.h. CONSENSUS/65% chGVssuGshDphuhphANtLlGNstssAulEhTht..GsplpFpps.sh.lAloGAshs CONSENSUS/50% +lGVssSGAMDshAhRlANcLVGNsssAAuLElTLs..GPsLcFps-.sl.lAlTGAchs Q5NI65_FRATT/14-0DTYIDAH-----KK-----------------VSYNQVFMLNKGQKLE---FKGIKK-G-- CONSENSUS/80% spl...s.s......................h...tsh.httGphLp...hs..tt.G.. CONSENSUS/65% spl...s.G...ps.................ls.hpshtlptGphLp...hutspt.G.. CONSENSUS/50% upL...D.G...ps.................lssapshpl+sGssLs...lGpscs.G.. Q5NI65_FRATT/14-0--FRTVVLAVKAES-EIQDLVAN------------------------------------- CONSENSUS/80% ..hRsYlsht.GGh.ps..hhGShuT.hhuthGG.t..G+.LttGDhl.h.......... CONSENSUS/65% ..hRuYLAlt.GGl.cls.hLGSpST.hhuthGGht..GRsLptGDhL.h.......... CONSENSUS/50% ..sRuYLAls.GGl.-VPslLGS+STaspuulGGap..GRsLpsGDlLsl.......... Q5NI65_FRATT/14-0---------------------TRSPQLASYISETYR--------NNLIRILKGPE--YN- CONSENSUS/80% ..........................hs...hs.ht...........ltll.Gsp...p. CONSENSUS/65% .....................tthtthstthhPshs.......tthhlcVl.Gsp...-. CONSENSUS/50% ...s...t.s...........ssssplssshtPshs.......pshslRVlhGPc..s-. Q5NI65_FRATT/14-0------ILKDKS---FLENSWAISVNSSQMGLSL------EGV--AFDT----------- CONSENSUS/80% .......Fp.tshtthhtttaplp.pusRhGhRL.......G...t..h........... CONSENSUS/65% ......hFstpshppFhsspapVs.pSsRhGhRL......tGs..p.ph........... CONSENSUS/50% ......hFoccuhcpFasssWpVospSsRhGhRL......pGP..pPch........... Q5NI65_FRATT/14-0-QKIEMISQPVTDGTIQLAPSG-PIV-LLRHRQTV-GGYPRIANVIEADISKLSQYTPGS CONSENSUS/80% ..stphhspshs.Gslphsss..Pll.lhsDt.oh.GGasp.uslhph-l.tluQh.sGp CONSENSUS/65% .pssplhspuhshGulQlsssGpPIl.LhsDt.oh.GGYsphusVhps-L.+luQhpsGs CONSENSUS/50% hcsuslhSculslGuIQVPuDGpPII.LhsDupTs.GGYPplAsVlsADLs+LuQl+PGc Q5NI65_FRATT/14-0KIRFKLVSLEEAISENT--RLKQLT---- CONSENSUS/80% tlpF..hshtpu.t........t.h.... CONSENSUS/65% pl+Fh.lshppAhthht...t.pth.... CONSENSUS/50% plRFpslohc-Apsttp...ppcth....
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |