203122.Sde_3513_from_3_to_137ITKQEFARRRKA----LMAMMEPD----------------------SIAILPSAAEKTR- CONSENSUS/80% h..t.attpRtt....lhtth..........................hhll.su....h. CONSENSUS/65% hstp.attRRpp....lhpplhst......................thsll.sustthp. CONSENSUS/50% hssspaspRRc+....Lhspltss......................ussllhuusppsR. 203122.Sde_3513_from_3_to_137-SRD-THYSFRQ------------------------------DSDFYY------------ CONSENSUS/80% .stD...h.aRt..............................ps.FhY............ CONSENSUS/65% .ssD.spasFRQ..............................cotFaY............ CONSENSUS/50% .ssD.scYPFRQ..............................-SsFaY............ 203122.Sde_3513_from_3_to_137------LSGFDEPNAVLVLIP------------GREHGEVVMFCRERDKEK--------- CONSENSUS/80% ......LsGhtpPtshhhl...................p.hLah..hs.t.......... CONSENSUS/65% ......LoGhsEPsuhhll................tttcthLFs.tps.pt......... CONSENSUS/50% ......LTGasEP-ullllts............ttptscslLFlpc+Dscp......... 203122.Sde_3513_from_3_to_137--EIWDGYRAGPE--GACEKYGAD--DAFPIDD------LDEILSG-----LMEGRERVY CONSENSUS/80% ..thW.G.h.u.p..th.t.hshc..tsh.htp......htt.l.t........tt..hh CONSENSUS/65% ..EhWpGhphu.c..tAtphhuhD..pshshsc......lsphLst.....hhtstttlh CONSENSUS/50% ..ElWsGhRhGs-..uApcpaGlD..cuasls-......lcctLsp.....hhpssssla 203122.Sde_3513_from_3_to_137YAMGKDPSFD CONSENSUS/80% h........t CONSENSUS/65% hhhstpsths CONSENSUS/50% hshspssshc
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |