END4_BACSU/1-2 RIGSHVSMSGKHM-LLAASQEAVSYGANTFMIYTGAPQNTRRKKIEDLNIEAGRAHMQEN CONSENSUS/80% hhG.phuhts.......s.htsht..hpshthhhht.pth.t..hppt.hpthtthhpp. CONSENSUS/65% hlGs+hosuus...h.tuhhpuhshtspshtlFsts.cphtth.hppcthcphtpthcc. CONSENSUS/50% llGuHlSsAGs...hhpustcAhshsupuhtlFstss+sapssslsc-ss-ch+pss+cp END4_BACSU/1-2 ---GIDEIIVHAPYIINIGNTTNPSTFELGVDFLRSEIERTAAIGAKQIVLHPGAH-VGA CONSENSUS/80% .......lhsHusYhlNh.ss.p.thhptuh.hhhpph.hstthGhthhshHsG.h.htt CONSENSUS/65% t......lhsHusYlINh.uo.cpphhEpuhphlhp-hptscplGhphlshHPG.t.htp CONSENSUS/50% s....stlhsHAPYlINl.uSscccplE+ShctlhcElpcscplGlptlVlHPGus.lpp END4_BACSU/1-2 GAEAGIKKIIEGLNEVID-----PNQNVQIALETMAGKGSECGR-SFEELAQIIEGVTHN CONSENSUS/80% spptshpplhpslpphhp.........hhhhh.phsGptsthG..th.plt.lhphhpph CONSENSUS/65% scEpslpplhcslsplhs.....ptttshlllEshuGpssplG..phppLttllphlcpp CONSENSUS/50% o+E-ulscllcuLscllc.....pspsllllLEssAGcGsplGp.sh--Lcpllctlcsp END4_BACSU/1-2 EQ--LSVCFDTCHTHDAGYN----IVEDFDGVLNEFDKIIGID--RIKVLHINDSKNVKG CONSENSUS/80% ....ltsClDhsHhastuhs......pshtphhpphpphlGhp..hlphhHhppSt..hG CONSENSUS/65% pp..lulClDTCHhaAuGhs..lps.pshpphlcch-shlGhp..hlcslHlNDSch.hG CONSENSUS/50% s+..lGVClDTCHhFAuGa-..IsohpuacclLccl-shlGhc..hl+slHlNDSKsshG END4_BACSU/1-2 ARKDR-HENIGFGEI--------GFDALQYVVHHEQLKDIPKILETPYVGEDKKNKKPPY CONSENSUS/80% tth-+.Htsls.t.h........s.psh.hhh...thp.hshllEps............h CONSENSUS/65% uptDR.HtslutGhl........GhcshthlhttpphptlPhllETs............h CONSENSUS/50% us+DR.HcsLGpGtI........Gh-shchlhsccchcslPhILETPst..p......ha END4_BACSU/1-2 RFEIEMLKEKQ CONSENSUS/80% tt-h.hhtth. CONSENSUS/65% pp-lthlcphh CONSENSUS/50% pcEIphl+chp
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |