44689.DDBDRAFT_0167983_from_806_to_945DDFDELFGITNDDNNQTA-----NGIGGGG------------SGEEEMDKFDFE------ CONSENSUS/80% .ttp...hLDhp-h.s.s....s..ss.......hhss.....h.sshtshshs...... CONSENSUS/65% tppp...LLDL-DhsPss....Ph.sPs......hlos....slsschpulohs...... CONSENSUS/50% scsspssLLDLDDhsPsu...tPlssPusu....lLoP....oLsoDL-GLoLo..pssl 44689.DDBDRAFT_0167983_from_806_to_945--NYINS-------TTKSVKKILLKPTISG-GLSIDYCFIRIRDNEEFSCQPRYNIIQLN CONSENSUS/80% ..ph.ss..........shcphcLLpphsGtGLsspYtFsR....ps..hssthlslpl. CONSENSUS/65% ..slssP........hsssKpaELLp+hsGpGLuspYpFoR....pPphhuspMVulplp CONSENSUS/50% h.slsoP.......sasssKoaELLc+loGcGLulcY+FoR....pPslaSscMVSV-lp 44689.DDBDRAFT_0167983_from_806_to_945IKNQSDETFTDISIINKNLIDGADISE-------------------FDPIES-IEPNQAI CONSENSUS/80% hpNpsst.lpplpltp.p..tuhphpp...................Fs.It..Ltsttoh CONSENSUS/65% hsNsosptlpsIplspccL.uGhplp-...................FspIps.LtPspoh CONSENSUS/50% FoNsoDcsIpsI+lG-KKLsuGMclpE...................FsEI-o.LsPGsSl 44689.DDBDRAFT_0167983_from_806_to_945QKQIYVLFNSTSQ CONSENSUS/80% ph.htlsFpcohp CONSENSUS/65% oshhGlDFsDoTQ CONSENSUS/50% TsllGIDFsDSTQ
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |