39947.LOC_Os05g50360.1_from_7_to_200EEAAATPGAGGAPAAGRLKGCPELMVD-DDMREMAKT--AAWSVSS-----CKPGNGVAS CONSENSUS/80% .ptt..........................h.phsp...t.hplSS ...s.tltp CONSENSUS/65% .ptpss..t...................tthp-lsph..AhaslSS .+sutslsp CONSENSUS/50% pcscsssspttt................tpl+-lusp..AsWoVSS tKsGsGVsp 39947.LOC_Os05g50360.1_from_7_to_200LRDDNLDTYWQS--DGA-----------------------------QPHLVNIQFQK-KV CONSENSUS/80% Lhcss.ppaWpS..sG..............................tsHhlplph.p.ts CONSENSUS/65% LpDss.pTaWQS..DGs.............................tPHhlslpFt+.cs CONSENSUS/50% L+Dsss-TYWQS..DGs.............................QPHhIsIpFp+.+V 39947.LOC_Os05g50360.1_from_7_to_200QL-QLVVVYV---DFKLDESYTPSKISVRAGDGFHNLK---------------------- CONSENSUS/80% .l.t.l.hhh....h..DpSYhPphl.lhsGps.psh....................... CONSENSUS/65% tl.ptltlal...shphD-SYsPsplslhuGsshpcLp...................... CONSENSUS/50% sl.pplslal...DaptDESYTPo+IslpuGsuhsDLp...................... 39947.LOC_Os05g50360.1_from_7_to_200EIKTVELSKPV--GWVHISLS--------------------------------------- CONSENSUS/80% pht.hph.ts...t.h.l.......................................... CONSENSUS/65% -lpslplppsp..GWltl.......................................... CONSENSUS/50% ElpslclssPs..GWVsl.h........................................ 39947.LOC_Os05g50360.1_from_7_to_200--------------------------------------------GADPRETFIHTFMLQI CONSENSUS/80% .................................................t..hhh.hlpl CONSENSUS/65% .................................................stslpshhlQl CONSENSUS/50% .............................................ptptspsl+shhlQI 39947.LOC_Os05g50360.1_from_7_to_200SVLSNHLNGRDTHIRQIKIYGPRPNHVPHQPF---------------HFTSREFVTYSTV CONSENSUS/80% tlhtsppsGhDo+lRtlplhu...t............................h...tsh CONSENSUS/65% tlhpNHpsG+DT+lRtl+lhu.pps.........................s.thhthpsh CONSENSUS/50% slhsNHQNG+DTHlRul+laGPppst.....................thsssshsphsol
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |