5207.CNA02310_from_214_to_340/1-127LSHVQQRQNFLKTFMGYFQNI--------------------------------GQQ--PP CONSENSUS/80% .........ahpplhtahp.p................................s.sh.t. CONSENSUS/65% tttppppptFlppLhpFhcpp................................upsh.ph CONSENSUS/50% pspscsccsFlcsLtcFhcc+................................Goslp+l 5207.CNA02310_from_214_to_340/1-127PAIFDN-------------GEREGAFKV-------------------------------- CONSENSUS/80% P.l................ttp...................................... CONSENSUS/65% Phl................st+t..................................... CONSENSUS/50% Ptl................us+s..................................... 5207.CNA02310_from_214_to_340/1-127---------------------------------------GDGWMDVIDLLMAVM-KAGGI CONSENSUS/80% ...........................................lsLh.lh.hV..phGGh CONSENSUS/65% ...........................................lsLapLaphVp.phGGh CONSENSUS/50% ...........................................lDLapLaptVp.ctGGa 5207.CNA02310_from_214_to_340/1-127MN--------------AMQQPADSPTWRNLLAVKNI-PTTLPYPIPAPKPP--NSDPNAP CONSENSUS/80% pt.............................htttp.Wtplhpthth..........ts. CONSENSUS/65% pp.............................VsppphWpplspphshs.......tssss CONSENSUS/50% cp.............................Vspp+pWsclupcLuhs.......sssus 5207.CNA02310_from_214_to_340/1-127PTMTTDPVQYLTAA---------YFAYIHGFE CONSENSUS/80% s..lpph................Y.phlhsa- CONSENSUS/65% uppl+pt................Y.+hLhsaE CONSENSUS/50% ussL+pp................Yp+hLhPYE
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |