262724.TTC1891_from_8_to_102LIVRE-------------PYASLIVDGRKVWEIR----------RRKTRHRGPLGIVS-- CONSENSUS/80% hthht..............hht.lhpG.Kphphp..........t......uph.hh... CONSENSUS/65% hthtt.............phhphllsGpKphphR.........tcthhps.Gphhhlh.. CONSENSUS/50% lsFps.............casshllsGcKTsTlR........tpcshsps.Gchlllh.. 262724.TTC1891_from_8_to_102----GGRL------IGQA-DLVGV--------EGPFS--------VEEL----------L CONSENSUS/80% ....t.tt.........h.hh.h.........ht.h.........htpl....t...... CONSENSUS/65% ....shps.......p.hshlphh........lphht........hpcl..spp.....t CONSENSUS/50% ....sscs.......pshsslclpp.......Vphhs........hs-l..spc.....c 262724.TTC1891_from_8_to_102AHQEKH-----------------LAEEAFLRAY---------------------AKDEPL CONSENSUS/80% s..ts..............th...h.p.h.thh........................... CONSENSUS/65% uhh-G..............sht.thhphhppha.......................st.. CONSENSUS/50% AtpEGt............tols.phccshccha.......................sspp 262724.TTC1891_from_8_to_102YAWVLENAFRYEKPL CONSENSUS/80% .....hhh.thp.h. CONSENSUS/65% .....hhh.pachlt CONSENSUS/50% p....lsslcFcllp
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |