CDGT_BACSS/53- QVFTDRFLDGNPSNN-PTG---AAYDATC----------------------S-NLKLYCG CONSENSUS/80% phhsp.Ft.t.................................................. CONSENSUS/65% plhscpFtpsssss.............................................h CONSENSUS/50% QlascpFpcussss.............................................s CDGT_BACSS/53- GDWQGLINKINDNYFSD--------LGVTALWISQPVENIFATINYSGVT---NTAYHGY CONSENSUS/80% tthtslhpcht..alt.........hGhsslalsP..ps..................ttY CONSENSUS/65% GshpGlhp+lc..YLp.........hGhsulWloPhhcs................s.ptY CONSENSUS/50% GDlpGIts+L-..YLps........LGlsulWlSPlacus...............sscGY CDGT_BACSS/53- WARDFKKTNP---YFGTMADFQNLITTAHA--KGIK----IIIDFAPNHTSPAMETDTSF CONSENSUS/80% t..sa..ht....thGs.tphpphltthpt..hshc....lhhDhVhNHhu......... CONSENSUS/65% pht-ahtlss...paGohp-hcpLlpps+p..pGl+....lhhDhVhNHtustt.h..t. CONSENSUS/50% DlsDYpplss...caGTtsDFcsLlscsHc..+Gl+....lllDlVhNHoospp.hFtps CDGT_BACSS/53- ---------------------------------AENGKLYDNGTLVG------------- CONSENSUS/80% ............................................................ CONSENSUS/65% ht.................st.....s................................. CONSENSUS/50% htp................ss....tshhhhp............................ CDGT_BACSS/53- --------------------GYTNDT---------NG--YFH-HNGGS-DF--------- CONSENSUS/80% ......... ......t.p.................................. CONSENSUS/65% ...ssh... ..athssap.................................. CONSENSUS/50% ...ssh... ..assssash.tt.............................. CDGT_BACSS/53- ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ....................................................t....... CONSENSUS/50% ...................................................ts....... CDGT_BACSS/53- --------SSLENGIYK------------NL-------------------YDLADFNHNN CONSENSUS/80% ...........t....................s........................... CONSENSUS/65% .........hhp..................t.s-lshtp..................... CONSENSUS/50% ........hatc..............h.hsthPDLNhpss.................... CDGT_BACSS/53- A--------------------------------------TIDKYFKD-AIKLWLDMG--- CONSENSUS/80% ...........................................h.shthss..hh..... CONSENSUS/65% ...................l.pthht.h...hhphG.......lsGaRhDssthh..... CONSENSUS/50% ..................tVppplhp.hhphhlchG.......lcGFRlDsspthtt... CDGT_BACSS/53- ----VDGIRVDAVKHI-------------------------------------------- CONSENSUS/80% ............................................................ CONSENSUS/65% ...............................................s...hhthhpth. CONSENSUS/50% ..............................................tshsthhphhpphp CDGT_BACSS/53- --------ALGWQKSWMSSIY--------V----------------------HKPVFTFG CONSENSUS/80% ............................................................ CONSENSUS/65% ........thh.........................hhtEh.t................. CONSENSUS/50% ........phhs.ht..................t.hhluEshss................ CDGT_BACSS/53- EWFLG--------------SAAS--DADNTDFAN---------KSGMSLLDFRFN----- CONSENSUS/80% ............................hpa...................t......... CONSENSUS/65% p........................thshpathh...........h.t.hs...th..ht CONSENSUS/50% ps..sphtthht.........t...phshsFphh..........tthshhs..hshtphp CDGT_BACSS/53- -SAVRNVFR-DN-TSNMYALDSM-----------------INSTATDYNQ----VNDQVT CONSENSUS/80% ...................htt...................................... CONSENSUS/65% t..................hsph...............shs................... CONSENSUS/50% ph.................hsph..th.......tpsssass.................. CDGT_BACSS/53- FID---------------------------NHDMDRFKT-----SAVN------------ CONSENSUS/80% ............................................................ CONSENSUS/65% .........sHDp.R.........ht.............................hphh. CONSENSUS/50% .........NHDptRshs.....ths..........................tpphchhs CDGT_BACSS/53- -------------NRRLEQALAFTLTSR-GVP-AIYYGTEQYLTG---------NGD--- CONSENSUS/80% .............hh.s..ht......................t................ CONSENSUS/65% hhhhhh..G.s.hlh.upphsh.................tt..ss............... CONSENSUS/50% shhhshs.GsP.hlapGcEhGhss..........hs...ppstss............... CDGT_BACSS/53- PDNRAKMPSFS----------------------KS-------------TTAFNVISKLAP CONSENSUS/80% ............................................................ CONSENSUS/65% .................................hp.h...R................... CONSENSUS/50% ......h..p.ttp............t..ht.hhpthsshR................... CDGT_BACSS/53- LR CONSENSUS/80% .. CONSENSUS/65% .. CONSENSUS/50% ..
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |