AMY_STRVL/381- TNWWDNGNNAIAFGR-------------G-SKAYVAINHETS---ALTRTFQTSLPAGSY CONSENSUS/80% tphassss..hhatR.............G.shuhlshN.t.....th..shtTsLPsG.Y CONSENSUS/65% pshWsNss..luFsR.............G.spuhlAhNpsst...shspshpTsLPsGsY CONSENSUS/50% ssWWsNGspplAFuR.............G.scGFVAlNpsss...slspsLpTuLPuGoY AMY_STRVL/381- CDVQ-----------SNTP----------VTVNS----SG-QFTATLAANT---AVALHV CONSENSUS/80% sshhts.........su............lpVt.....sG.hh.hplsstt....hula. CONSENSUS/65% sDlluG........hsG.s..........loVs.....sG.hsshslsuss...hlAlas CONSENSUS/50% CDVloGt......tpoGps..........lTVss....sG.pssholuuss...slAlHs AMY_STRVL/381- NAT CONSENSUS/80% .st CONSENSUS/65% tsp CONSENSUS/50% suc
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |