Consensus terms for the Agglutinin domain

Q8S390_AMAHP/2-0 AGLPVIMCLKSNNNQEYLRYQSDNIQQYGLLQFSADKILDPLAQFEVEPSKTY-DGLVHI
CONSENSUS/80%    h.hPh.hshhpssNt.YLth....IpphshLpFu.spl.Dshs..ph.s..s..sG.lpI
CONSENSUS/65%    hsLPKhYVsFKGNNscYLRspo..IQQhshLQFSuDcIsDPpVsaElFP..TY.NGsV+I
CONSENSUS/50%    hsLPKhYVsFKGNNscYLRspo..IQQhshLQFSuDcIsDPpVsaElFP..TY.NGsV+I


Q8S390_AMAHP/2-0 KSRYTNKYLVRWSPN-HYWITASANEPDENKSNWACTLFKPLYVEEGNMKKVRLLHVQLG
CONSENSUS/80%    KSpahN+a...Wp.s...WIhssus-s.pspp..tssLF+s.hh.....phltL.pht.s
CONSENSUS/65%    KSsYhNKF...WRLS.csWIhADuNDPcEo+-..AsTLFRslhl-...hchIuLLNlQpo
CONSENSUS/50%    KSsYhNKF...WRLS.csWIhADuNDPcEo+-..AsTLFRslhl-...hchIuLLNlQpo


Q8S390_AMAHP/2-0 HYTENYTVGGS-FVSYLFAESSQIDTGSKDVFHVID
CONSENSUS/80%    hahcphTsst...hshh.Atsppls...pshhcl.t
CONSENSUS/65%    +YsKRaTuGKs.FlSCLNAAossIDp..cAlL+VI-
CONSENSUS/50%    +YsKRaTuGKs.FlSCLNAAossIDp..cAlL+VI-

The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:

ClassKeyResidues
alcoholoS,T
aliphaticlI,L,V
any.A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y
aromaticaF,H,W,Y
chargedcD,E,H,K,R
hydrophobichA,C,F,G,H,I,K,L,M,R,T,V,W,Y
negative-D,E
polarpC,D,E,H,K,N,Q,R,S,T
positive+H,K,R
smallsA,C,D,G,N,P,S,T,V
tinyuA,G,S
turnliketA,C,D,E,G,H,K,N,Q,R,S,T