Q5CC35_CARAU/6-0 LLCCVLLCLACCVTVHTHMIIE----------EQNSSNQTTISLQANNQTDAPSVLIVGL CONSENSUS/80% hhhshlLshhhhhsh.shh..p...........t.ts.ctht.....p.h..spl.hhuh CONSENSUS/65% hLhshLLshhhhlsh.ohhssp..........tt.tstcshc...t.s.h..splphluL CONSENSUS/50% MLsAsLLuCLCLLTlaSHLuuE..........EuLuDsRul+ssSuhNpsDhPSVSIVGL Q5CC35_CARAU/6-0 SKTPK----KNNKMEKKQ---------KKKFSTHVKRP-----P-PPPNCVPLWGSCKTP CONSENSUS/80% p...+....thptpptcp.........c.t.htplhps........st.CVthh-SChs. CONSENSUS/65% ptpsK....+hstpcu-pthhppt...cttshspVhcs.......sPp.CVth+-SChs. CONSENSUS/50% sKKsK....Klo+cEAEcchppp+...+KpulscVLRP...c.h.sPRRCVRL+DSCKuP Q5CC35_CARAU/6-0 SAACCDQCAFCHCRLFKTVCYCRMG CONSENSUS/80% t.sCCDPCA.C.CRhFpshC.CRhh CONSENSUS/65% tssCCDPCAoC.CRFFpuhC.CRhl CONSENSUS/50% usACCDPCAoCaCRFFNosCYCRKL
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |