5085.AFUA_4G11330_from_13_to_146/1-134NKDASAWAKTYLKEKLRTLSA----EE--DG---------------------------VS CONSENSUS/80% -+sh.sWupphhpp.h.thth......tttt............................. CONSENSUS/65% -KsstsWu+phlpphlhshph......pppt...........................hh CONSENSUS/50% EKssosWo+-cL+cpLsulsl......ps-s...........................sp 5085.AFUA_4G11330_from_13_to_146/1-134VKISDLLTMD--GDVDVSQRKGKVITLFDVK----LQLEY---EGK----TKDQVS---- CONSENSUS/80% h.lpplpphp..G-sphs.RKGKhh.ha-hp....lphth....h......t...p.... CONSENSUS/65% hplsclsplp..G-sslspRKGKlIhha-hp....lphsa...pGp.....tst.c.... CONSENSUS/50% scIocVssl-..GDAsVupRKGKlIshYDhc....lplsW...pGp....sssppc.... 5085.AFUA_4G11330_from_13_to_146/1-134-----------------------------------VSGTITIPEVAHDTEEDEYV----- CONSENSUS/80% .....................................GplplPphs.-p..p........ CONSENSUS/65% .....................................GplplPplup-spt--h...... CONSENSUS/50% ...................................hpGolsIPElSc-s--D-hp..... 5085.AFUA_4G11330_from_13_to_146/1-134-----------FEIENYSDSA--SKQP-VKDLVRSKLV------PQIRQELGKLAPALIA CONSENSUS/80% ...........htlp..ptt...t....hhthh.tthh.......plpp.h.ta.ttLh. CONSENSUS/65% ...........hplshpppps..pp...lpshhppphh......spl+ptltpahptLhp CONSENSUS/50% ...........hslohsc-ss..cps..l+sll+pcsl......s+lRcsLssatpcLls 5085.AFUA_4G11330_from_13_to_146/1-134EH--GK CONSENSUS/80% t....p CONSENSUS/65% pa..tp CONSENSUS/50% ca..uc
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |