195102.CPE1061_from_228_to_349TYE-YYAKPVNTYKVSKGQ--TVGYGCLFKADKD-MEIGIIECGNVHGL-----GISREI CONSENSUS/80% shp.lpsplh.l+pl.tGp..sluYGtpahstp..thluhlshGYuDGh........R.h CONSENSUS/65% shs.Lpuplhtl+pltsGp..sVuYGtsahspcs.ppluslslGYADGa.......sRth CONSENSUS/50% lMo.LcocllpV+clsuGc..uVGYGsoasus+s.oplAllslGYADGa.......sRsh 195102.CPE1061_from_228_to_349KNNVFYD----------IFRMIYRRFKERSVIF------NNNVP------VKILGK---- CONSENSUS/80% .t..........................h.lhl.......tGph......h.hlGp.... CONSENSUS/65% ss..........................s.Vhl.......sGpt......ssllGR.... CONSENSUS/50% us..........................spVll.......sGp+......sPlVGR.... 195102.CPE1061_from_228_to_349----VNMNITIISMENC-----------------------------------SK------ CONSENSUS/80% ....lsMD.hhl-lst..................tht.G......s.l.lhG.t...... CONSENSUS/65% ....lsMD.hhlDlss..................psthG......spVhLhGpp...... CONSENSUS/50% ....VoMDplsVDlochs................slplG......DcVsLaGps...... 195102.CPE1061_from_228_to_349----------DSV----LKVDISPIISDSSIE--KRYI CONSENSUS/80% ..shpphAthhso....lsaElhstls..Rh...+hhh CONSENSUS/65% .hssc-lApthsT....IsYEllstlut.Rls..Rhah CONSENSUS/50% .lol--lActsGT....IsYEllsslus.RVP..RlYl
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |