243275.TDE0726_from_6_to_103VSDLEFENQE-------------WACLIRSSDV--------DAKIIDIEIPD-------- CONSENSUS/80% sGpu.astD.......h.s.l..ahhhhtushs........tuplhtlDhst........ CONSENSUS/65% oGpupYssD.....hthsshL..authlpSshu........+uclhulDsst........ CONSENSUS/50% TGcApYscD.....hphsGhL..ausllRSPhA........HA+IpuIDsos........ 243275.TDE0726_from_6_to_103---LPEGF--SFFSAKDIVG---KNSIGFL---------------------KTEVPVFAD CONSENSUS/80% s.thsGVh..tlhshtsh.......................................h.. CONSENSUS/65% AhthPGVh..sllotp-hst.........h..........................hhst CONSENSUS/50% ApshPGVl..sVlTucDlPs...tshsssh.......................sp.llus 243275.TDE0726_from_6_to_103EK------------------------IEYAGQAVGILTGPDKKKLLELSSLF--QIKT-- CONSENSUS/80% ..........................h.h.sp.lshVlAps...Atpuhphl..tlpa.. CONSENSUS/65% sp........................VtahGp.luhVlAcshttApcAschl..clcY.. CONSENSUS/50% sc........................VpasGpslAsVVA-optpAccAuctl..cV-Y.. 243275.TDE0726_from_6_to_103-QYLS CONSENSUS/80% .p.h. CONSENSUS/65% .-.hs CONSENSUS/50% .EsLP
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |