349307.Mthe_1450_from_4_to_175MEIARFGKKLVEQGLTGSRFGNISVL---------------------------------- CONSENSUS/80% ttlhthhh.h.t.ths.hh.uphSht.................................. CONSENSUS/65% pplhtstphhhphuhsptssGslSs+.................................. CONSENSUS/50% pclssss+tlscpGhssusuGNlSlRh................................. 349307.Mthe_1450_from_4_to_175--TEDGIIITCTGSMLDDID-------ERQVVLVERDGECADD----------------- CONSENSUS/80% ....thhhlps.uh.htthp......stphhhhpht........................ CONSENSUS/65% ...tthhhlssoGhthsphp......spslshlshp......................t. CONSENSUS/50% ..tssthlIsPSGlsascls......ss-llhlDhst.....................sp 349307.Mthe_1450_from_4_to_175--------------------------------SLASCETPVHRAIYRST-------DARA CONSENSUS/80% h.................................ss.th.hH..lht..........hts CONSENSUS/65% hhttt.............................sos-hhhHhtlapth........hts CONSENSUS/50% lssss............................hPSuEhslHsslYctp.......plsu 349307.Mthe_1450_from_4_to_175VIHTHSPY--------AVALSLLE---DVVMP-----------------------IDSEG CONSENSUS/80% lhHsHs.h........hhshs..t.................................... CONSENSUS/65% llHsHssh........ssuhuhht...............................hp.hs CONSENSUS/50% VlHoHosa........usAlusts............................h.hpstss 349307.Mthe_1450_from_4_to_175IAFLG---------------EMPVVDGQFGSE--KLASAVSDALMD-------------- CONSENSUS/80% hhh.................h.hh.h...h.........htt.h................ CONSENSUS/65% hhht...............th.hhsats.s......stplupth.tt............. CONSENSUS/50% thhs...............plshssYtssu...tt.spclucslsptht........... 349307.Mthe_1450_from_4_to_175------------------HRACIARGHGVFAKGG------DLRDAYITASMAEHSSKIRY CONSENSUS/80% ....................shlltpHGhhshG.......shtpAh.hh..hc.hsph.h CONSENSUS/65% ....................shlltsHGhhshG.......sltcAhhhh.hlEphsch.h CONSENSUS/50% ...................pulLLpNHGllssG.......slp-AhppsttlEcsAcltl
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |