Consensus terms for the Alpha-L-AF_C domain

Q64ZF7_BACFR/63-0EENGNL-----------------------------------HNVQRAIVHATVQNVVRRH
CONSENSUS/80%    sEassh.................t..................sh.sulh.uhhh.hh.+p
CONSENSUS/65%    sEassW.............t.t.st..............p..shpsALstushlhsh.+p
CONSENSUS/50%    DEWuVWa............cs-sup........s..hl.p.solcDALssAsaLsslcRp


Q64ZF7_BACFR/63-0GDFILTTCAANALQPYLQNDNGWD----------------------QGQIFFTPG--QVW
CONSENSUS/80%    uDhVthAshA.hhss.t.............................s.hh...s.....h
CONSENSUS/65%    uDhVphAshA.hlssls.............................Phhhth.ut..phh
CONSENSUS/50%    uD+V+MAslAQLlNVls.............................Phhlstsus..psa


Q64ZF7_BACFR/63-0GMPTFYAQQMSSAHHH--------------------------------------------
CONSENSUS/80%    hpssaas.thht..tt.s.hh.......................................
CONSENSUS/65%    tssoYashphastptt.uphls..sp..................................
CONSENSUS/50%    tosoYasaphausasc.ussLs..ss..................................


Q64ZF7_BACFR/63-0------------------------------------PLRLWSE---------------TV
CONSENSUS/80%    ................................hps...h....................h
CONSENSUS/65%    ................................lps.sphpstt...............th
CONSENSUS/50%    ................................lsu.spYssps...............sl


Q64ZF7_BACFR/63-0GEL---------------------------------------------------------
CONSENSUS/80%    s.l.........................................................
CONSENSUS/65%    shl.........................................................
CONSENSUS/50%    ssl.........................................................


Q64ZF7_BACFR/63-0---------------------------------------------------DM-------
CONSENSUS/80%    ....................................................h.......
CONSENSUS/65%    ...................................................sh.......
CONSENSUS/50%    ...................................................ss.......


Q64ZF7_BACFR/63-0------------------------------------------------------------
CONSENSUS/80%    ............................................................
CONSENSUS/65%    ............................................................
CONSENSUS/50%    ............................................................


Q64ZF7_BACFR/63-0----TATTNEARDEVIL-HVVNTSSE--VRETQVS--LSG---F------------IPKG
CONSENSUS/80%    .....sshsppt..lhl.hhsNhs.p..shthplp..htG...h..............t.
CONSENSUS/65%    ....sushspps.plhl.tlsNhs.p..shslpls..lpG...h............shps
CONSENSUS/50%    ....sAspsc-utplpl.plVNhssst.ssslsls..lsG...h......t.....ssps


Q64ZF7_BACFR/63-0NMEIYTLSGELNDENLP---DTP----TRILPK--TTWK----QAPG----SDFTY--SF
CONSENSUS/80%    sph.hltsts..s.Nsh...tp.....p.lhs............t.t....tthph..tl
CONSENSUS/65%    spthhLsusshtstNoh...pps....ptVhPt..sht.....tthpt...sphph..pl
CONSENSUS/50%    upsplLsusclpspNoh...ssP....spVsPp..sssh....sssst...splss..sL


Q64ZF7_BACFR/63-0PGYS
CONSENSUS/80%    s.hS
CONSENSUS/65%    sshS
CONSENSUS/50%    PshS

The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:

ClassKeyResidues
alcoholoS,T
aliphaticlI,L,V
any.A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y
aromaticaF,H,W,Y
chargedcD,E,H,K,R
hydrophobichA,C,F,G,H,I,K,L,M,R,T,V,W,Y
negative-D,E
polarpC,D,E,H,K,N,Q,R,S,T
positive+H,K,R
smallsA,C,D,G,N,P,S,T,V
tinyuA,G,S
turnliketA,C,D,E,G,H,K,N,Q,R,S,T