O56869_9ALPH/44-0DWLRNPGPPALVNAPKY--V--------RPSKCSASFLAKNALTELQFADWDKIQHVLKT CONSENSUS/80% sh.ss........s..h...........sP.sssPshLhppLlp-LsFs-GPtLhshh-p CONSENSUS/65% ulhsss.ss..s.usth..s...ph..ssPpsssPshLappLlp-LsFsEGPsLlshhEp CONSENSUS/50% uLLusssss..stussh..s.phpluhsPPcsASPuuLYpRLlsELsFuEGPuLLosLE+ O56869_9ALPH/44-0INIDIFSCVPVGENGLCNMDWFSLDTEKIWTLMDSGTPNV----SPNLLITPG--PPPEC CONSENSUS/80% hN.DlFSshPhs.clYtch.hLSssss-Vlt....thspt....t.lslts+G..shPp. CONSENSUS/65% hNEDLFSChPhNt-LYpchthLSssss-Vlp....ssssp....s.lsLps+Gs.shPps CONSENSUS/50% WNEDLFSClPsNsDLYs-sslLSTsP--Vlc....ulPss...ssslDLssHGspshPsl O56869_9ALPH/44-0IKTPEEAPAYFEAISNYFESVLAAREAEYAKLLAEYAKSLAKYIRHKSQKVGRGLRALEL CONSENSUS/80% Pt..-tLs.YstslppaFhsELcAREptYtpLhhtYCpulhpaLptpspp..cs....s. CONSENSUS/65% Ptpc-tLPsYVpulppaFhsEL+AREcpYspLLhsYC+ALhpYLptsspp..+G.t..st CONSENSUS/50% PAoc--LPuYVpuVQcFFhuELRAREEsYu+LLssYC+ALl+YLRuou++spRGspspss O56869_9ALPH/44-0DTEEAKKRFTVLMKSEYYKGIEKLLIIFLVHLVLNACRDVARIIWVQQRDSSSVLQKVTY CONSENSUS/80% .t.....ph+t.lttcYYR-suplARlLalHLYlsssR-luhtlaApQ..t.slFssLph CONSENSUS/65% .t.p...ph+p.lttRYYREsApLARLLaLHLYlsssR-lSW+LaApQshtpslFsuLph CONSENSUS/50% sp.c..p+hRQslpsRYYREsA+LARLLYLHLYLolTREVSWRLaApQstpQDVFsuL+a O56869_9ALPH/44-0RW-ESQQLHCIFQPLLVSPGPVFLDNDPLPLQTLQHVNYVRYLLGVPVLRFSMIEE--SP CONSENSUS/80% tW.ptRQhpClFpPllhsHGhVhlcstsls.tpLpplNYhRppLGLPLlRsuhlEE.tsP CONSENSUS/65% pWtptRQhpClFpPlLaNHGlVhl-stsLsstcLpclNYhRccLGLPLlRsuLlEE.suP CONSENSUS/50% cWsQpRQFsCLFHPlLFNHGlVhLEGcPLsupcLRclNYRR+ELGLPLlRsuLlEEcsuP O56869_9ALPH/44-0SAQYIPYDKTAPSAYDVLATIARTCLTSSGCSRA-------SHDHTYARDNEKP-NYSSS CONSENSUS/80% Lst.P.apsphPRu.GaLhp.l+sKh-sYup.ts......sht-HsYu+.ht...sYGoo CONSENSUS/65% Lst.PsFsuphPRu.GaLhppIRsKh-uYSptps..s...sht-HsYu+.hps..NYGoo CONSENSUS/50% LsptPsFSushPRosGaLsapIRuKL-AYSssHsspPt.psppEHoYARsscss.NYGST O56869_9ALPH/44-0RIVLLADSALD CONSENSUS/80% hEuh.hsssss CONSENSUS/65% hEuh.hcsPsP CONSENSUS/50% lEAM.lDPPSP
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |