Q6FUD2_CANGA/746-848-SR-MLSFKRGILF---SSSLLKIL-YRLD--YPSPEEPYQ------QKISLTF-INESE CONSENSUS/80% ..........h.hh...ppp.lplt.hp.t......t..........h.h.hhh..Nts. CONSENSUS/65% .sp..s.hsthsha...pssslplt.hphp..pp.ssp.........hplthhh.sNps. CONSENSUS/50% .sp.hsstsslsla...csssLpIs.hphp..pp.ssp.........lplslpa.sNpos Q6FUD2_CANGA/746-848-WDMTNFSTNI-----IP------------------------------------------ CONSENSUS/80% ..shpph.h.h....shs..p....................................... CONSENSUS/65% .pslsshthph....uss..c....................................... CONSENSUS/50% .sslosFshQs....AVP..K....................................... Q6FUD2_CANGA/746-848----------------FRTDSN-PEY------------VVQ-EISLLSALD-------IA CONSENSUS/80% ............plt.h.s.ss.s.l.s.t........hpp..h.l.s...........h CONSENSUS/65% ..........shplp.lts.ss.ssl.stsp.......lpQ..htltsstt.......ht CONSENSUS/50% ..........shpLp.LpshSu.sslssssp.......lpQ.slplsssss.....tslc Q6FUD2_CANGA/746-848PRRRTEQTLD---IIIRRQFNAEYSP CONSENSUS/80% .phchta.hts.............hs CONSENSUS/65% h+h+lsaphss.....pp.t.s.phs CONSENSUS/50% h+l+loYphsu..tshpcpspshphP
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |