Q96L96_HUMAN/16-0GLRKASQAKVIYGL---EPIFESG-------RTCII------------------------ CONSENSUS/80% ...thh.t.h.hth.....shspGt......R.sh..h...................... CONSENSUS/65% hptpahtpthhlpl..ttpsFucGuh.....Rhsat.stpht.................. CONSENSUS/50% ppspWtsspstlpl..cppPFu+Guh.....RpAac.spshst................. Q96L96_HUMAN/16-0--------------------KVSSLLVFGPSSETSL-------VGRNYD------VTIQG CONSENSUS/80% .................t.tt.hs.p.hhp.h.t.h..........hhp..........p CONSENSUS/65% .................tttpphlsKhhtpph.psh........p.aFc..........- CONSENSUS/50% .................psspphVuKhap+cshpss........ppYFc..........- Q96L96_HUMAN/16-0CKIQNMSREYCKIFAA------------------------------------EARAAPGF CONSENSUS/80% hphQhhsp.hsptaNp........................................hp.. CONSENSUS/65% lchQhhsptauppFNp........................................hps. CONSENSUS/50% lchQshuccaApcFNp........................................tss. Q96L96_HUMAN/16-0G--EVPEIIPLYLIYRP--------ANNIPY------------------ATLEEDLGKPL CONSENSUS/80% ...t.lphh...lh.h.........pt......................hhhE..h.Gpa CONSENSUS/65% ...cplpalsshlhhh.........pppts.h.................hslE.hltGca CONSENSUS/50% s..+pIcFlsspllclh........ccsssth.................aslEPhlpGcF Q96L96_HUMAN/16-0ESYCSREWGCAEAPTASGS---------SEAMQKCQTFQHWLYQWTNGSFLVTDLAGV-- CONSENSUS/80% hKassN..G...t.......................sFuHaoa..ottphllsDlQGV.. CONSENSUS/65% hKYNsNs.Ghs.pttppst...............spuFSHaoaphSstphllsDlQGV.. CONSENSUS/50% pKYNsNs.Gtlpssscssp...............spAFSHFTYccSssphLVlDlQGV.. Q96L96_HUMAN/16-0--DW---KMTDVQIATKLR----GYQGLKESCFPALLDRFA-SSHQ--CNAYC CONSENSUS/80% ..s....hhTDPtlhp.......t..hs.sNhG.tuht.Fh..pHt..CNthC CONSENSUS/65% ..sp...hhTDPtIHots.....thshu.sNhGtpGlppFh.tpHp..CNplC CONSENSUS/50% ..sc...hLTDPpIHopD.....GhsaGpuNLGpcGIspFh.poHc..CNslC
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |