PLYD_ERWCA/24-247VVLGSSLKTSALTKVVFG------------------------------------------ CONSENSUS/80% .hhh.h.......h.hs........................................... CONSENSUS/65% thhhhhtt.....lhhs........................................... CONSENSUS/50% shllplspp....llls........................................... PLYD_ERWCA/24-247------------------SNKTIVGSFGGANVLTN-IHLRAESNS--SNVIFQNLVFKHD CONSENSUS/80% ..................u.pol.G.sspstl.t..htlhh..sp...slIlpslthpp. CONSENSUS/65% ..................SsKTI.GpGsssplts..hslplptsp...NVII+Nlplcss CONSENSUS/50% ..................SsKTIsG+GusscIss..sGlplppss...NVII+NLcI+cs PLYD_ERWCA/24-247VAIKD-----------------NDDIQLYLN----YGKGYWVDHCSWPG---------HT CONSENSUS/80% ......................t.Dultl.......upplWlDHsph.tt.......... CONSENSUS/65% hst.s................t-sDuIsl......supplWIDHsohsps.......... CONSENSUS/50% pssss....s...........sDGDAIsIp.....sSsslWIDHsolocs.......... PLYD_ERWCA/24-247WSDNDGSLDKLIYIGEKADYITISNCLFSNHKYGCIFGHPADDNNSAYNGY-PRLTICHN CONSENSUS/80% ........DuhhDhh.sushlTlS.shhppaphs.LhGtsss....t.......lTht.N CONSENSUS/65% ........DGllDhhpuushlTlSsshhppHpcshLhGpuDsp.t.-pt...hplThtaN CONSENSUS/50% .......pDGLlDlspGSsslTISNsaFssHcKshLlGsSDocss.Dcs...h+VTluaN PLYD_ERWCA/24-247YYEN-IQVRAPGLMRYGYFHVFNNYVNKFQ-------------LAFTVAQNANVISERNV CONSENSUS/80% hatp.h.tRhPthRhu..hHlhNN.att.t.............huhsst.tsplhspsNh CONSENSUS/65% aFtp.l.pRhP+hRaG.hhHlhNN.apphp.............aAlssutssplhupuNh CONSENSUS/50% aFss.lspRhPRlRaG.hlHVhNNhYssas.............YAIGuussusIlSEGNt PLYD_ERWCA/24-247FGSGA CONSENSUS/80% F.tst CONSENSUS/65% F.sss CONSENSUS/50% Fpuss
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |