351746.Pput_3564_from_125_to_2MQIRIVNFA---ETRVAALEHQGPPGL------------VSESVARFRQWRMHSGQSPV- CONSENSUS/80% .t.ph.ph....th.lhhhp..h................h..hhtph.t.h...t..... CONSENSUS/65% hphplhphs...shplsulptpss.t.............hsthhpphhthhtttth.... CONSENSUS/50% hsscIpchs...shplsulcppsshp.............lsphapchtphtpppsh.... 351746.Pput_3564_from_125_to_2--ASS-RTFGIPYDNPDTTP---------AHAFRFAVCGEID------------------ CONSENSUS/80% ........h.hh...................thph.hsh.h................... CONSENSUS/65% ........hslhhsp.t.t...........tphph.hshtsst................. CONSENSUS/50% .....sthhulatsssssss..........schcahlulslsst................ 351746.Pput_3564_from_125_to_2-EAVQPNDFGVHERVIPAGRCAVIRHTGS-----------PDYIGETIYPLYRDWLPSSN CONSENSUS/80% ..........h..h.lsttphshh.................pth.thht.hht.h...t. CONSENSUS/65% ........tththhplsuupaAshph...............psltpsaptlhp.hh.tst CONSENSUS/50% .......spslpttplPuGcYAlhphpt............hcslscsapplasphhspus 351746.Pput_3564_from_125_to_2EE-----LRDHPLFFDY-LSVYP-------ETPLEQWQTDIYVPLK CONSENSUS/80% ..............hphh.t................h.hclhhsl. CONSENSUS/65% ..........tss.hEha.pt.............tphhs-lhlPlp CONSENSUS/50% p.......ttssssaEhYtsp..........ssssphpsEIalPlc
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |