L0JUD2_NATP1 M------------------------------------------------------TNDLE CONSENSUS/80% M........................................................pL. CONSENSUS/65% M......................................................op-LE CONSENSUS/50% M......................................................TsDLE L0JUD2_NATP1 PLAPAQAMQMYLNERRHELADATIQSHRYRLKQFVQWCEQDGIDNLNEFSGRDIHRFRVK CONSENSUS/80% slsP.puhphaltchp.pht-uTh.sh+.Rht.FspWC-pptItNLNphouRplhca... CONSENSUS/65% PLuPtpAlEhaLpcRcsplsEATIpSaRhRLppFVcWC-EcsI-NLN-LTGRDlaRacsh CONSENSUS/50% PLSPEEALELYLc-REsELoEATIcSHRYRL+aFVEWCDE-GIDNLNDLTGRDLHRYRlW L0JUD2_NATP1 RRNEDELVTASMKGQLATLRMFLRFCATIDAVEPGLDEKIILPTTT-EDDARTELLNPER CONSENSUS/80% RR..s.ls.ho.ptQhsTl+.hlcahtpl-us..sL.pKl..Pph..ttpspp.hlps-p CONSENSUS/65% RRsEG-LusAohKsQLuTLRhFLRahspl-uV-pGLsEKVcsPols.tpcsR-.hLsuER CONSENSUS/50% RRsEGDLSsATLKTQLuTLRlFLRFCAcIDGVE-GLuEKV+lPTLTsE--oRDVLLcAER L0JUD2_NATP1 AQQILKFLNQYRYARLEHALMEVLWHTGLRIGAAIGLDIDD--YNS-------------- CONSENSUS/80% ApplLt.Lp.YchAphtHshh.lhW+shhRhuuhhuLDlpD..hps.............. CONSENSUS/65% ApQILcaLcpYcYAohcHslhtILWHTuhRlGAh+uLDl-D..acP.............. CONSENSUS/50% AcQIL-FLEcYRYASR-HVlFAILWHTGMRlGALRALDLDD..Y+P.............. L0JUD2_NATP1 ------DEQYLMLVHRPEEGSSLKNGRKSERLVALSDSICEVLDDWLSV-NHPGVRDQHG CONSENSUS/80% ......D..hL.h.HR.-pso.lKNtcpuER.VhLusp.hpllpsalts.p+.thpsp.s CONSENSUS/65% ......D-.aLhlcHRP-pGTsLKNtccGERhVALSDslspllcDalss.cR.shpDDtG CONSENSUS/50% ......DEQYLsLRHRPDEGTuLKNGEDGERLVALSDSlCEVLDDYIuV.KRP-VTDDaG L0JUD2_NATP1 REPLFATKID---RLSRTRGRTIVYQYTRPCVYSDSCPHNRDLDG---CDALPTERSHA- CONSENSUS/80% RcPLhsop.s...R.ttsphht.h..hTpPC.hs.tCPHstD.ps...C-Ah.ptttht. CONSENSUS/65% R+PLhsocpG...Rsu+oolRphlYphTpPChYu.sCPHsRD.-s...CEALspctuau. CONSENSUS/50% RKPLFTT++G...RlSRTTIR+aVY+LTRPCVYGsoCPHNRDPED...CEALco-AAHS. L0JUD2_NATP1 CPSSLSPHPVRRGAITHFLKSDVPENVVSDRMDCSEAVLDRHYDQRSEREKLRQRRRYLP CONSENSUS/80% CPSShSPHslRpGuITa.hppths.phVu-Rhsso..Vl.tHYD..s..c+ht.R+p.L. CONSENSUS/65% CPSShSPHslRRGuITHhLsS-lP.plVS-RsssS.tVLcpHYDpRoppEKMppRRcaLs CONSENSUS/50% CPSSRSPHPIRRGSITHaLNSDVPPNVVSDRsNVScEVL-cHYD+RTcREKMcQRR+YL- L0JUD2_NATP1 G---N CONSENSUS/80% t.... CONSENSUS/65% p...h CONSENSUS/50% +...l
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |