cek02b12_7 --RQQIQEMRRISSQPDGKSTDPKSAERTSAFCFECEA-NNPQWVSVSYGIWICLECSGI CONSENSUS/80% tthhp.lpp.................tsphCh-Cst..pPpWsShshGhhlChpCuulHR CONSENSUS/65% pthhphlpp.................sNphChDCus..sPpWsShshGshlClcCuulHR CONSENSUS/50% cptlppLRshs...............uNspCsDCGu.ssPsWuSlslGlaLCl-CSGlHR cek02b12_7 HRSL--GVHLSFV---RSVTMD--KWKDIELAKMK--AGGNRKFAEFLQSQPDYKEKWT- CONSENSUS/80% sl..Gsclohl...+SlphD..tap..pl.hh....huNt.hpphaptt........... CONSENSUS/65% sL..GsHlShV...+SlshD..sWp..plphhh..thGNpsssphacsphh..sh..... CONSENSUS/50% uL..GsHISpV...RSloLD..sWsppcLctlp..ptGNcssNphaEusssspstptpss cek02b12_7 ----------------IQEKYNSRAAALFRDKVA-CEAEGREW CONSENSUS/80% ...............p..hpphhttpY..thh.h...ttt. CONSENSUS/65% ...............ppphpphlttKYpp+hh.h.h.ppp. CONSENSUS/50% ..............scpchcsalpcKYcc+ta.ltspssct
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |