218491.ECA4126_from_30_to_344GVTIYATGGTIAGKAESNTATTGY--KAGAIGIQELLNAVPAIGDVA------------- CONSENSUS/80% plhllhTGGTIu...s..t..h....t.t...h..hh....t.................. CONSENSUS/65% plhllsTGGTIuhpts.tssssh...shst..l.thh.th.p.................. CONSENSUS/50% +lhlluTGGTIAussssssuslss..sssshsltptlsslspht................ 218491.ECA4126_from_30_to_344------------------------TVTGEQIAN----TASGNIDQAILLKLSKAINKQLG CONSENSUS/80% ...........................h.........lsStphp.t.h.tltpt....ht CONSENSUS/65% .........................h.scphhp....lsSpshssp.hhplspth.ttht CONSENSUS/50% ........................plpsEplss....lsSssMosscWhcLAccltpphs 218491.ECA4126_from_30_to_344DSN-T----H-GVVITHGTDTLEETAFFLDLTVKS-----EKPVVVVGAMRPATA----- CONSENSUS/80% ..........pGhVlhHGTDTht.TA.hLshhhp.......hPllhsGu.hs.st..... CONSENSUS/65% t.........-GlVlsHGTDThp.TAhhLshhlp......spPVVlTGu.Rssst..... CONSENSUS/50% pt.th.....DGlVITHGTDTLEETAhhLshslc......sKPVVlTGAMRPusp..... 218491.ECA4126_from_30_to_344-----ISADGPMNLLEAVTLATS----------KNAEKRGALVLLND-------RIGSAF CONSENSUS/80% ......tsDu..NlhsAl.....................tVhlhhps.......plhtut CONSENSUS/65% .....huuDG.hNLhsAl.hA.t..............htGVhlshss.......plhpup CONSENSUS/50% .....luoDGstNLhsAltsAss...........tupspGVlVshNs.......clasAp 218491.ECA4126_from_30_to_344YTTKTNATALDTFKANEQGYLGAFYGGVPRFFYQPAAPENKPFFDVSNKD---------- CONSENSUS/80% .spKhpstthssFtu.t.s.lu.h.................................... CONSENSUS/65% pspKhposshsuFpS.shssluhlt.t.....h...t....................... CONSENSUS/50% cVsKs+Tssh-AFpSsstGPLGhlststhhhtth.hpph..................... 218491.ECA4126_from_30_to_344-------------------------------TLAKVDILYGYQDQDS--GLLNAAI-EQG CONSENSUS/80% ...................................V.llhhassh.s...hhthhht... CONSENSUS/65% ...........................hpt...spVsllhhasGhss..thhphhhtt.. CONSENSUS/50% ...........................hssttpscVsllpsYsGhsu..sllcsllsss. 218491.ECA4126_from_30_to_344--------------------------AKGIIIAGSGNGATPTR------IKEDIKKAVAK CONSENSUS/80% ..........................hpGllltuhG.Gphs.t..........h.thhtp CONSENSUS/65% ..........................hcGlVltuhGsGshstt......hh..lpphhpp CONSENSUS/50% ..........................s+GlVlcuhGsGNlsss......hlttlccslcc 218491.ECA4126_from_30_to_344G-----IPVVISTRTGSGYVTDKKKDGA-------------------------------- CONSENSUS/80% t.....l.llhsops.tG.s.......s......... ........... CONSENSUS/65% u.....lslVhsopshpG.ls.shhttut........ ..h.t...... CONSENSUS/50% G.....lsVVhoSRshsGpVsssshssGs........ .pLhp...... 218491.ECA4126_from_30_to_344---IGSGFYNPQKARILLSLALSNGDDIEKIR CONSENSUS/80% hshl.stthssttAhhhLhhhLstt...ttht CONSENSUS/65% hGslsutshssppAhlhLhhhLups.s.pplp CONSENSUS/50% sGlIsus-Lssp+ARlKLhhsLupspsspclc
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |