269482.Bcep1808_2389_from_68_to_220KDLRRWST-ADKAR-----VQQWFGR-SD-----------------DATRATLISGLSAI CONSENSUS/80% p.l.t.t....ttc.....h.paFGp.hs.................tsthphl.sthstl CONSENSUS/65% p.Lsthss..tppR.....hppWFGs.hs.................psphpplhsshspl CONSENSUS/50% scLssass..spsR.....apoWFGo.as.................supcspltssaspl 269482.Bcep1808_2389_from_68_to_220VRVLNKLT---GSNFMRWDGARYQYIGCVP-NPNTSGVVAEVCSPDTATHTIAIHAD--- CONSENSUS/80% .th.pt.......................s..................sthhhl..t... CONSENSUS/65% tpshpp......................ps.phps......sCt...ssphsYlhss... CONSENSUS/50% psshsshp....................sPhshcC......sCps.huspasYVassp.. 269482.Bcep1808_2389_from_68_to_220-----FCT-MRD-FSWEK-DSVVSTLIHEASHFSDT--------MGTKDHR---YFMD-K CONSENSUS/80% .....hCt.h.t..shtshDSpsuTllHEhoHhs.h........htopDh....hs.p.s CONSENSUS/65% .hthahCs.hhp.tshsGhDSpsuTllHEhSHFsss........hGTpDh...sYGts.u CONSENSUS/50% .hplahCsuFas.sPsoGsDS+uGTLlHEsSHFsss........tGTcDh...sYGps.u 269482.Bcep1808_2389_from_68_to_220CLTLG----------------TENPEQAINNADSIAGYVI CONSENSUS/80% stthu................tppst.Al.NAsshthah. CONSENSUS/65% utsLA................pspPspAlpNADshEaahE CONSENSUS/50% upsLA................pssPcpAlpNADoaEYFsE
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |