316279.Syncc9902_0725_from_321GVSAWMKGFGGNSRADNSSIL----------YNDYDLSSYGTSFGVDIALSDS------- CONSENSUS/80% t.thahthhtt.............................sh.hGhs............. CONSENSUS/65% ptshWspshush.p.psttttstt...............hGh.hGh-hhhttt....... CONSENSUS/50% ssulWspuhGuptptsssssssssthp...........tsGhtlGsDhttsss....... 316279.Syncc9902_0725_from_321--FQIGAYANYGDVRIQHSS-DDTGGG--------SWDSDGWGGGLTAQYSTRN------ CONSENSUS/80% ..h.huh.hthsptp.p.t..................t.tsh.hshhhth.......... CONSENSUS/65% ..hhhGhhhshupsphphsstt.............phpssshthuhassh..tt...... CONSENSUS/50% .phplGhstuaucsstchsssss............pscscuaphusYushttss...... 316279.Syncc9902_0725_from_321-----------------FYVQGLLGASEFSGEQTRNILQI-------NQDFGANT----- CONSENSUS/80% .................hhhph.hthsh.p.p....h....................... CONSENSUS/65% .................hhlsshhshuhhp.p.ptthth..................... CONSENSUS/50% .................halcusluYuttcscsppshstst................... 316279.Syncc9902_0725_from_321---------AKGDKKVTSYLGALRMGAPFKVGG----------VVLEPQAQAVWTQNRED CONSENSUS/80% ..........ttthpstshthththu.................h.hpP.hth.h..hp.t CONSENSUS/65% ..........psphpspshssphpsu.hhhh............hhlpPhstltahphp.s CONSENSUS/50% ........tspusacupshuuslcsGhhhhhss..........htlsPhuslsasplcpc 316279.Syncc9902_0725_from_321GFSETSGTEKN--------LRLKYKDRATNFLETELGMKVSMPIRTGDR----------- CONSENSUS/80% thptp....... .........t.t..p.tth.h.hGhphth.................. CONSENSUS/65% sap-pt...... ........htht.pshpshtsplGhchthththtt............ CONSENSUS/50% uasEss...... ......hthshsspstsslpuslGl+sstphshsss........... 316279.Syncc9902_0725_from_321--------SLLVPSLRAAWLADWNQNNEAQQIGYKFTNQTVD----------FDSQLETQ CONSENSUS/80% ..............h.hth..th.t.............................t...tt CONSENSUS/65% ..........ht.hhphshhpphtsp......thh...............h.s.ssshsp CONSENSUS/50% ..........lpshspluatcchssss.pstsshhht............shsstusshsc 316279.Syncc9902_0725_from_321NGALIEAGLDYTIQNFNRTSLKVYARGGAEVWGG CONSENSUS/80% t.h.hthshph.httth.h.hthth.httt..t. CONSENSUS/65% sththshuhphthspththhhshphphttpttpt CONSENSUS/50% sssplslGsshplssshslssshssptusssssp
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |