234267.Acid_6968_from_1_to_84MPDLEKLHEAVIEGDWKGAAAMTRAAIADG------------------------------ CONSENSUS/80% ..h.ppltptlhps.tp.h.t.hpphhtt............................... CONSENSUS/65% hsl.ccLtpsllcGppptl.p.sccuhpph.............................. CONSENSUS/50% tslp-+LpcAllcG-c-tlpcslc-ALsps.............................. 234267.Acid_6968_from_1_to_84--VAPLTIVTGCLVPAMDEVGRRFEREEYFVPEMLISARAMKAAM-EIVR-PLLAAIG CONSENSUS/80% ...tshpllpt.Lh.uMp.VGchattsphhlPpll.uucsMptuh.thLp.shhtttt CONSENSUS/65% ..hpPlclIppsLhsGMphVGcLFtpGchaLPpllhSAcsM+tul.shLp.Phhpppp CONSENSUS/50% ..tcPl-IIsssLhsGMclVG-LFssGchFLPpVlpSA-sMKsAV.uhLc.Palccpc
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |