5875.TP01_0831_from_95_to_190LVVPETM------------LEEEFQKAW--LESEHSYSTEMESYPN----DLNLEEFEGL CONSENSUS/80% hh.shph............p.p.F.ttW..hpl..t.p..h.h........ht.psh.th CONSENSUS/65% hs.stph............ptphF.ppW..pslssppctphphpss.....hss-sltpt CONSENSUS/50% Flc-upM............-+csFpsTW..+slPsuNEpphplpss....plssDolpsp 5875.TP01_0831_from_95_to_190FLKLNIVTLVTKIFT-----KILRLQ---VKMVALV------------------------ CONSENSUS/80% hp..sl.pluht..tsp....hha.....hp.spsh................hLhch.hp CONSENSUS/65% lps.NlholAtppspsp...phhYhu...hphsssh...............hhLhElhlp CONSENSUS/50% LQssNIaTIAp+sscuQ...-hlYhS...sKpssul...............hlLsELplp 5875.TP01_0831_from_95_to_190----QCT----CILKTNK--GMKIHKLINNLEQYIT CONSENSUS/80% .t...h.....htlKppt...th.t.hhp.hpthht CONSENSUS/65% sts.php....lslKsps..spshphhhpshcsllp CONSENSUS/50% ssssshp....lolKscs..s-lsptahpsl-slLc
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |