3702.AT3G19184.1_from_130_to_2FTKPMLQSHVTGGF-WLGLPLPFCKAHMPKRD-----------------VIMTLVDEEEE CONSENSUS/80% Fht.hh..........h.lPhpahpt.h.......................hhhhs.ttt CONSENSUS/65% Fhphhhssp..pps.hlhlPtpFspp.h.t.p..................plhlhs.pst CONSENSUS/50% Fhpshlsusshpcs.pLtlP+sFsccpshshp.................pclsLpspsuc 3702.AT3G19184.1_from_130_to_2--ESQAKYLAQ---------KNGLSGGWRGFAIDHQLV-DGDAVVFHLIARTTF-----K CONSENSUS/80% ...Wphth.h..........h.h.t..WppFsttptlt..u-.hhh.h.tt.th.....h CONSENSUS/65% ..pWphphphptt.......hhhhs.GWppFspspsLp.sG-hhsFphhtptph.....h CONSENSUS/50% ..sWplclptcsp.....thhhhhutGWccFspspsLc.sGDslsFchtpspsh.....h 3702.AT3G19184.1_from_130_to_2VYIIRVN CONSENSUS/80% hthht.t CONSENSUS/65% lphhpts CONSENSUS/50% lslhsss
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |