243273.MG_195_from_226_to_398KANY----FGGLFLRQINQH-SSPWTVKGLLINQMIKP-VNYYVDKANLVTVFTA----- CONSENSUS/80% ht.h....hhtthh.s.p.t..o..hhtp+L.tsthps.hsshl-ltNhhhhphs..... CONSENSUS/65% hssh....ahtphlpslpht..SP.hhpc+LttsGhRs.lsslVDlsNalhlchG..... CONSENSUS/50% ssPp....ahu+llcslcsshsSPtWLpcRLcpuGlRs.IsslVDlTNYlhL-hG..... 243273.MG_195_from_226_to_398------QPIHCHDAD-----RIVG---------NIELKQATHNE---------------- CONSENSUS/80% .......shpshDhp...................l.lp.s.ttt................ CONSENSUS/65% ......pPhHuaDhs......ht...........lhlchuptsE................ CONSENSUS/50% ......pPlHAFDh-.....plps.........tlsVRpAcsGE................ 243273.MG_195_from_226_to_398-------------------------------TFVGLDDKQYEIE---------------P CONSENSUS/80% ..................................hhttp.h.ht................ CONSENSUS/65% ................................hhhLsspphplp................ CONSENSUS/50% ................................hssL-scchsLs................ 243273.MG_195_from_226_to_398GDIVVCDE-----------------------KGIIALVGIIGSKRTMVQ---------PT CONSENSUS/80% ...hl.s............................slssh.Gs................. CONSENSUS/65% ..hllts........................ttshsluGlhGu.tstht..........t CONSENSUS/50% ..llIsD........................ptslulAGlhGGtpotls.........pp 243273.MG_195_from_226_to_398TTNIFFEVVNCNSETIKQTAKRFLINNFASKFMVK-PISLLATDNCLNYLQNSLLTTDN CONSENSUS/80% ...lhh.shh.s.ht.thptpphtl..csshh.....hs.thh..shphhhthl.phss CONSENSUS/65% o.slhlEsuhasshshttsucphslho-ust+hc+.slD.phs.huhptsspllhchsu CONSENSUS/50% TpslhLEuAhFsspslppou+ptsLpo-uotRFER.GlDsstsppAl-cAssLlt-lsG
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |