Consensus terms for the B5 domain 

186497.PF0990_from_280_to_349PKEFEVSFEYIRKLSG-LELS----------------------------NEEIKELLERM
CONSENSUS/80%    ...lthphp.hpphhGht................................tph.phLpph
CONSENSUS/65%    .t.lplphpplspllGhph..............................tppltphLppL
CONSENSUS/50%    spslslchccls+lLGhsls.............................sc-lpclLp+L


186497.PF0990_from_280_to_349M-------------YEVEILS------------------------------ENKAKVKYP
CONSENSUS/80%    t.............hth.....................................h.l.sP
CONSENSUS/65%    u.............hphp....................................htVtsP
CONSENSUS/50%    G.............aslshtt...............................tthpVslP


186497.PF0990_from_280_to_349AFRD--DIMHT--------------------------------RDVLEDVLIAYGY
CONSENSUS/80%    shR...Dl.h..................................DlhE-lh+hhGa
CONSENSUS/65%    saR...Dlthp................................tDllEEluRlaGY
CONSENSUS/50%    oaRh..DIppc................................sDLlEEVARlYGY

The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:

ClassKeyResidues
alcoholoS,T
aliphaticlI,L,V
any.A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y
aromaticaF,H,W,Y
chargedcD,E,H,K,R
hydrophobichA,C,F,G,H,I,K,L,M,R,T,V,W,Y
negative-D,E
polarpC,D,E,H,K,N,Q,R,S,T
positive+H,K,R
smallsA,C,D,G,N,P,S,T,V
tinyuA,G,S
turnliketA,C,D,E,G,H,K,N,Q,R,S,T