O49889/1-133 HEIAVGDSVLVEHDE------------------------------------------PDE CONSENSUS/80% ..hthsshlhh.st.............................................t CONSENSUS/65% hphplGDhVhlpsss...........................................tp CONSENSUS/50% pplplGDsVhlcsss..........................................ssc O49889/1-133 LGCIYFVEYMFEKLDGS------------------------------------------- CONSENSUS/80% ..hlh.l.thh.ttttt........................................... CONSENSUS/65% shhlspl.clhtsppsp........................................... CONSENSUS/50% shhlucIpclhpsssss........................................... O49889/1-133 ------------------------------------KMLHGKMM----------QRGSDT CONSENSUS/80% ....................................h.htsphh..........h+spph CONSENSUS/65% ....................................hhlcspha..........hRsp-h CONSENSUS/50% ....................................ppl+lpaF..........aRPc-s O49889/1-133 VLGNA-------------------------------------ANEREVFLINEC----MN CONSENSUS/80% ..t........................ .. ...............p.lhhst....... CONSENSUS/65% .ttts...................... .. ..............hpElahopp....ps CONSENSUS/50% spspst..................... .. ...........ttppcElahS-p...pss O49889/1-133 LQLGDVKESIAVNIRMMPWGHQHRN--TNADKLETAKAEDRKRKGLPTEFYCKSFYRP-E CONSENSUS/80% h.httl.ths.Vh.ht.h..h..........................p.ahhp.hap... CONSENSUS/65% hshpslhu+CpVhhhsph.php..t.....................spsaaschhYss.p CONSENSUS/50% lslssIpGKCpVtptschssssspt....................tscsFaCchtYcs.s O49889/1-133 KGAFFRLP CONSENSUS/80% ttth.... CONSENSUS/65% ptshpph. CONSENSUS/50% spsFpsls
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |