O43538/14-216 NVQKR----LNRAQEKVLQKLGKADETK--DEQFEEYVQNFKRQEAEGTRLQRELRGYL- CONSENSUS/80% .htKt....ht+h.phh.pphthsctTp..s..app..pphp..pt.htcl.pthp.hh. CONSENSUS/65% thpKp....hsRstphhtpKhGts-tTc..DppFpph.pchcthpphsp+lhcphptal. CONSENSUS/50% slpKp....hsRAsQplpcKlGtuEpTc.hD-cF-chcc+hcspcstsc+Lh+cscpYLp O43538/14-216 -----AAIKGMQEASMKLTESLHEVYEP---------------DWYGREDVKM-VGEKCD CONSENSUS/80% ......shps..t...t.tc.h.phht.................httht..p..hh.hh. CONSENSUS/65% .....sshcshpth.pthscthtphhps...............thpthttsss.hspsl. CONSENSUS/50% .....sul+ucpssppphscshspshss...............supshsssss.aupsLp O43538/14-216 VLWEDFHQKLV-----------DGSLLTLDTYLGQFPDIKNRIAKRSRKLVDYDSARHHL CONSENSUS/80% .h.ps..phht...........phh...hthh.t.h.phppthp+htpthlDhDthp... CONSENSUS/65% phspshtphhp...p.......shl.shhphh.sphpplpcphpKhpp+hlDaDst+tp. CONSENSUS/50% clucshcchushp.ph....t.shlhshpshhsschp-lp+cl+KLpc+pLDaDus+pch O43538/14-216 EALQS--SKRK-DESRISK-------------------------------AEEEFQKAQK CONSENSUS/80% ...pp..th.........................................hppchp.utp CONSENSUS/65% tph+pttpp.........................................t---hctApp CONSENSUS/50% pps++pts+st.st.t..p...............................AEEElcpApp O43538/14-216 VFEE-FNVDLQEELPSLWSRRVGFYVNTFKNVSSLEAKFHKEIAVLCHKLYEVMTK CONSENSUS/80% .a-t..pt.h.pth.phht.th......h.thhphp..ahtphhphhtpl...ht. CONSENSUS/65% ta-p..pppltppl.phhshcht.hhpphpshhphphpaappshphhppltttltt CONSENSUS/50% cFEc.hsspLps-L.slhspclshhssplpsllcuQhcaaccstclLppLpppLsp
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |