Consensus terms for the BASIC domain 

MYF5_BOVIN/1-1   MDMMDG--------------CQFSPSEYFYDG-SCIPSPDGE-FGDEFEPR------VAA
CONSENSUS/80%    M-lhts..............s.F.stp.FYDs.ssh.ssc...hh-tht........hs.
CONSENSUS/65%    M-Lh-s..............s.F.ssphFYDu.sshsoscht.hhEphs.t......lsh
CONSENSUS/50%    MELh-os.............CtFssu-cFYDu.sCasSs-hp.aaE-h-sp......Luh


MYF5_BOVIN/1-1   F-GA-HK-----------ADLQGSDEDEHVRAP----TGHHQAGHCLMWACKACKRKSTT
CONSENSUS/80%    h....................tts.E-ctsh.s.....t.HpsGpCL.WACKsCKRKoss
CONSENSUS/65%    h.ss.h............t.htsspE-EHVpuP....sscHpsGpCL.WACKsCKRKoso
CONSENSUS/50%    s.us.hh...........sshpuucEEEHVRAP....oGHHQAG+CLhWACKACKRKSoo


MYF5_BOVIN/1-1   MDRRKAA
CONSENSUS/80%    hDRR+AA
CONSENSUS/65%    hDRRKAA
CONSENSUS/50%    sDRRKAA

The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:

ClassKeyResidues
alcoholoS,T
aliphaticlI,L,V
any.A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y
aromaticaF,H,W,Y
chargedcD,E,H,K,R
hydrophobichA,C,F,G,H,I,K,L,M,R,T,V,W,Y
negative-D,E
polarpC,D,E,H,K,N,Q,R,S,T
positive+H,K,R
smallsA,C,D,G,N,P,S,T,V
tinyuA,G,S
turnliketA,C,D,E,G,H,K,N,Q,R,S,T