gi|5732193|dbj| HKAALQRQLEAVRGRLPQLSAAIALVGGISQQLQ-------------------ERKAEAL CONSENSUS/80% .+.tltphlppl.tct.phppthtpl.phhp.lp...................pphtthp CONSENSUS/65% p+ttlpphlsplpc+ptphppshpplpshhpplp...................pptppsc CONSENSUS/50% p+psLpssLsclsc+psplpcsssplpstlpplp...................cspcssc gi|5732193|dbj| AQISAAFEDLEQALQQRKQALVSDLESICGAKQKVLQTQLDTLRQGQEHIGSSCSFAEQA CONSENSUS/80% tplp.th.plhp.lppttp.hltplpp.tttp.h.L.p.hpphp.h.pphpthhphhpph CONSENSUS/65% pplcsthcpLhptlpppcptllpclcphppp+hppLppQhpphpthpcplppshpasppt CONSENSUS/50% scIcstaccLpssLsc+ccpLlscL-stpcsKpcsLpsQhpslpsppcclssslpFspcA gi|5732193|dbj| LRLGSAPEVLLVRKHMRERLAALAAQ CONSENSUS/80% lp.sss.thl..pp.hh.thpth.t. CONSENSUS/65% lppssshtllhpcchlhhphpphtct CONSENSUS/50% LspusssslLhs+ctlspplppltcp
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |