7159.AAEL003004-PA_from_325_to_412SMFVGMLITRLVAPNEL-------INMSCTGHASLRFARLKKPDGSPMYPPTEKIDPRIF CONSENSUS/80% t.hsphLlh.lFspphh.......hpp.h.t...........t.t..h......Lssppl CONSENSUS/65% phhsphLlphLFscchL.......hpsssts.........sspps..hps....L-sp+l CONSENSUS/50% ctsA+aLlcpLFsc-sL.......ssSslsG..t......ssspG..+ps....LDPsKl 7159.AAEL003004-PA_from_325_to_412DFVCNKVAERT-----------AMRIGLDD-----------IHTIRKNSDERIIKRY- CONSENSUS/80% thlcthht..h.............thp.pp...........hhttlsshhtp..hth CONSENSUS/65% tslRpaltphh............sshc.s-......a....sltslsshhpphppph CONSENSUS/50% sAIR-aLpspa............Pss-hsE...t..Wph..ClssINsplcshppct
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |