5875.TP01_0366_from_443_to_504VPENS----------------VYIKSEYYE-------------------NLENICKRNKI CONSENSUS/80% lP+NtaGNl.lah.pMhP.sssalp........................sh.phs+hhtl CONSENSUS/65% lP+NpaGNl-lahssMlPhGsVHlphs......................shh+ls+cLsI CONSENSUS/50% VP+NsYGNl-lFpPsMlPtGsVHL+hP......................sls+lAK+LsI 5875.TP01_0366_from_443_to_504FFKRAFSSFH-----YEDGSVK-AKINGVLIRASDLQSFLKLY CONSENSUS/80% shu.AlsGFp.....hptt.sh.shhpGhlVtpp.tp.lhthh CONSENSUS/65% DaA.AVoGFc.....acputsh.PlhsGllVscchpchlhpta CONSENSUS/50% DaAsAVTGF-.....F+sGpup.PVh-GlVVscEac-sllcAW
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |