AAG57041/1759- AEISLAASKDPVIANN---NDLTTLTATVADTEGNAIANSE--VTFTLP-EDVRANFT-- CONSENSUS/80% t.hplpss.tthhuss....p..shpspVhct.spsl.s.t..Vshsh....s.h..... CONSENSUS/65% thhplpsspsshhAss...psshTlTspVhDs.GpPlsstp..VsFsss...ush..... CONSENSUS/50% ulsslsAspssllAss...s-usTlTloVpDspGsPlsups..VTFoss.stGss..... AAG57041/1759- --LGDGGKVVTDT----EGKAKVT----LKGTKAGAH--TVTASMAG-GKSEQLV CONSENSUS/80% ....t..t.hTst....pG.spht....hpu.tsGth..hlsAphts.t.t.tt. CONSENSUS/65% ...tp.spspTcp....sGhApls....lsospsGph..sVoAplss.sspspt. CONSENSUS/50% ..hss.ssssTDs....sGhAplo....LoSosuGst..TVoAolssssssssss
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |