A54136/1-208 EEHNKMVYFAISDYVFNTASLVYHEE--GYLNFSI-TDDMIPPDSN-IRLTTK------- CONSENSUS/80% .tpspMl.hhlS-ahhsohhhhh.pt..shhthpl.hst.h......hhhssp....... CONSENSUS/65% ttpspMlhhslS-ahhsohhhhhppt..GtLphpl.psshhsp....hhhTss....... CONSENSUS/50% sscc+MlalulS-alFNSlhhshaps..GsLsloI.s--MlPcpsp.hhLTTs....... A54136/1-208 --SFRPFVPRLARLYPNM-NLELQGSVPSAPLLNFSPGNLSVDP---------YMEIDAF CONSENSUS/80% ..hht.hh.plht.hPs..pltlthts.tsPhl.hp.tthsh............hplphh CONSENSUS/65% ..shushhPplsphaPs..plplphpshpsPtlshp.sshslh..........tsplpsh CONSENSUS/50% ..shGsllPclucpaP-t.slpLplsssusP+lslpssssslps.........ssslcsF A54136/1-208 VLLPSS-----SKEPVFRLSVATNVSA-TLTFNTSKITGFLKPGKVKVEL----KESKVG CONSENSUS/80% s..ssp.....s.t.l..hshthph.h...s.psphlhs.hphtch.lp.....htutlt CONSENSUS/65% sh.Psp.....shtslhhhshssshph.phshpscplhuplplp+hplpl....tpSsls CONSENSUS/50% ullPss.....ocsslhplslcsslsA.phusco++LpGpLcL-+hplcL....ppSslG A54136/1-208 LFNAELLEALLN-YYILNTFYPKF-----NDKLAEGFPLPLL-KRVQLYDLG---LQIHK CONSENSUS/80% .hs.t.lpthh...hh..hhh..h.....sthltpGh.lPh...thphhp.....lp.hp CONSENSUS/65% .hsst.Lpthhp.hhltthlhs.h.....sphLtpGh.lPh..ttlphhs.s...lphhp CONSENSUS/50% shssphL-slls.sllspslhPcl.....Nc+LpcGlPLPls.pslpLhcss...lslac A54136/1-208 DFLFLGA CONSENSUS/80% shlhlss CONSENSUS/65% shlhlss CONSENSUS/50% cFLlLus
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |