Consensus terms for the BRIGHT domain

P79353|P79353/1  RVKLNYLDQIAKFWEIQGS---SLKIPNVERKI--LDLYSLSKIVMEEGGYEAICKDRR-
CONSENSUS/80%    t....ahttl.pFhpppt....h..hP.http...lsLapLh.hV.phGGhptVstpph.
CONSENSUS/65%    pppptFhppLhpFhccpsp...h.plPhlstp...lDLapLahhVpchGGhppVsps+p.
CONSENSUS/50%    ccpcsFhcpLtcFhccpGss..lpclPtluscs..LDLacLaptVpccGGa-pVscc+c.


P79353|P79353/1  WARVAQRLNYPP----------------GKNIGSLLRSHYERIIYPYEMFQSG
CONSENSUS/80%    Wpplhp.ht.s...................t....hp.hY.chlh.a-.h..t
CONSENSUS/65%    Wpclspphshss.................sssuhpL+phYh+hLhsaEphhpt
CONSENSUS/50%    WccluccLuhsst...............sssuussL+ptYt+aLhsaEpahpp

The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:

ClassKeyResidues
alcoholoS,T
aliphaticlI,L,V
any.A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y
aromaticaF,H,W,Y
chargedcD,E,H,K,R
hydrophobichA,C,F,G,H,I,K,L,M,R,T,V,W,Y
negative-D,E
polarpC,D,E,H,K,N,Q,R,S,T
positive+H,K,R
smallsA,C,D,G,N,P,S,T,V
tinyuA,G,S
turnliketA,C,D,E,G,H,K,N,Q,R,S,T