184922.7031_from_6_to_359/1-354CALALPLRVPA-------D---DNALLKAIQNMGDGLPA--SASSDL--VQTIERYSALR CONSENSUS/80% .hh.h.h+pst......hs..h...htphl.tth.......pt.t.h..tpthtph.phR CONSENSUS/65% shlslslKpop.....pls..hstslpphIpppa.......psssta..pcpltplppLR CONSENSUS/50% shlslsLKcTc.....-lD..hspsLpcaIpppY......sccsssa..scclsclscLR 184922.7031_from_6_to_359/1-354TD---------------VKNMDSLKEAYSLAL--PLAKQLPWASKEFK-----------E CONSENSUS/80% pthht.........t...sshphhhp.Yht.L..hlt.+h.................... CONSENSUS/65% pshhss........spstsuhchLhc.YastL.thlpt+hs.sttp.............. CONSENSUS/50% psspss........scspuul-hLhc.YasQL.shl-s+Fssssppht............ 184922.7031_from_6_to_359/1-354LISQHSHHWIFEEA-----------------------------AATGEAT-SFLEP---L CONSENSUS/80% ....h.FpW.hssh................................st....t.ts...l CONSENSUS/65% ....l.FpW.h-sh................................sshs.hspps...l CONSENSUS/50% ....lpFsW.aDoh................................ouss.sspps...L 184922.7031_from_6_to_359/1-354MIDVVNILYNL--------GVLLARQAS-----------------------SPDQKE--- CONSENSUS/80% .hEhhshlaNh........ushhophutt.........sh...........p.tshc... CONSENSUS/65% taEpsslLaNl........uulhopluspp........spt..........sppul+... CONSENSUS/50% saEKuulLFNl........GALaSplAucp........sRs..........ss-GlK... 184922.7031_from_6_to_359/1-354NVLSLFAQAA------------------------------NLFEKA-------------- CONSENSUS/80% tuhp.hptuu..............................Ghhphl.............. CONSENSUS/65% pAhphappAA..............................Gsapal.............. CONSENSUS/50% pAsctFQpAA..............................GsFsaL.............. 184922.7031_from_6_to_359/1-354---------------------SEIVSEIQ----PLA-----DSSGCDFVDRNYLMAIL-- CONSENSUS/80% .....................tpph.tt......s......Dhp.t.lthh..hhh.... CONSENSUS/65% .....................pcphhps.....ss......Dhs.pslphLhplhl.... CONSENSUS/50% .....................c-satpu.....Pos.....DlosssLssLspLML.... 184922.7031_from_6_to_359/1-354----------------------HTVRGCGYESEVSRYV---------------------A CONSENSUS/80% ......................upAQEhhh.p.h.........................t CONSENSUS/65% ......................AQAQEshht+shhs.......................t CONSENSUS/50% ......................AQAQEshapKulhs.......................s 184922.7031_from_6_to_359/1-354AKGAPALI-AQEAAKAHRNFTHATEF---FDKLSEAT----------------------- CONSENSUS/80% .p.....h.hcls.p.......ssph...Ytts.p.h....................... CONSENSUS/65% hc...shl.u+Lutp.......suph...Yppshpsh....................... CONSENSUS/50% h+.tsull.AKLApp.......such...YspAtcsh....................... 184922.7031_from_6_to_359/1-354------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ 184922.7031_from_6_to_359/1-354------DVYYG----------------------LW-YTALFKKHYYEVVARYHISQYS-- CONSENSUS/80% .....p..h.t......................thhthhthK.thhtuhu.hh.uh.... CONSENSUS/65% ....tpsshps.h....................pWhphlphKtphapAhApaahuhth.. CONSENSUS/50% ...tppsslcshhsh..................sWtshlplKppaapAlAaYatAtst.. 184922.7031_from_6_to_359/1-354------------------------------------TPDNALKEIAEA------------ CONSENSUS/80% .....................................tttphtpt............... CONSENSUS/65% ....................................tpppchG-t............... CONSENSUS/50% ....................................pcsp+hGEp............... 184922.7031_from_6_to_359/1-354---VSLLE---------------------------------------------------- CONSENSUS/80% ...lshhp.................s.p.ht.s........................... CONSENSUS/65% ...lshLp................tu.pthptu....................ph.ht.. CONSENSUS/50% ...lutLp................pupcphppup.................t.spthpp. 184922.7031_from_6_to_359/1-354---GLKERLSALESLPSYGDAQKSYEDIKKLVGTGGKKKPSA----AAQLQEIDK----- CONSENSUS/80% ......h.t.hth..h.ph..tthpphpp-schh.ht.hP.................... CONSENSUS/65% .....hlpphlph..htpphptphpphp+-NDhlahptlPsh.......ls.htt..... CONSENSUS/50% ...sstlp-slsh..hpcplppclspscKDNDFIYppclPsh......pLstlpp..... 184922.7031_from_6_to_359/1-354LGVCLSDKTEYTY------------------ELPSVY---IP-SAGRVMSEY-------S CONSENSUS/80% hs.hts..........................h.shatthhPhth...........tt.h CONSENSUS/65% tshsps.shs.....................phschFpplsPhslh.........psphh CONSENSUS/50% tshl+ssshsps...................pssDlFp+LlPhuVaps.shaspccuchl 184922.7031_from_6_to_359/1-354DANA CONSENSUS/80% ...h CONSENSUS/65% ptph CONSENSUS/50% cpps
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |