234267.Acid_2742_from_106_to_246LDSRGNRSDAQRAYRATIE-----------------LDPNNAIAMNNLAFLLAEEG--TS CONSENSUS/80% hDh..htthhtts.t...............................httuhthhpG...h CONSENSUS/65% lDhttFpphhttuttt.tt.......................ththhptAlsLacG..sh CONSENSUS/50% lDlscFcstlspupsshss..................tt.ttuhptlcpALuLaRG..sh 234267.Acid_2742_from_106_to_246FDEAL----------QLARH-AMALMPD---SMQMTDTAGW-VQLKRG--DNDA------ CONSENSUS/80% hsth...........hh....ttthtt....hhthht.hht.h.hthu..p.tt...... CONSENSUS/65% Lsshs.t........astst.ttplpph...tlpshpthsp.tththG..chtp...... CONSENSUS/50% Ls-ls.ss.......aspsc.+s+Lcct...+lsuhcptsc.splstG..ctsp...... 234267.Acid_2742_from_106_to_246AIALFSDAVAKEPA-EDSFRDHLLMALERKGERAGIFGE---TISALKQA-PSPENLAKV CONSENSUS/80% hh..hpthht.pPh.pEthht.hhhhhht.GptstAht.apthtthLtpchGh.tPt.th CONSENSUS/65% sls.hpphlthcPh.pEphhthLhtshhtsGcpupALptapphpphLtc-LGl.pPusph CONSENSUS/50% AlspLpcllstcPh.cEchaptLMpALhpsGRpu-ALcsYcchRctLscELGl.-Puscl 234267.Acid_2742_from_106_to_246TSLLQGLK CONSENSUS/80% ttl.ttlh CONSENSUS/65% ppLhptll CONSENSUS/50% psLapslL
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |