S36018|S36018_1 TDVTLAVEG-----------------QHLKA-----HKMVLSAC---------------- CONSENSUS/80% tchhl.htt.................t.h.s.....p+.hLshh................ CONSENSUS/65% sDlhlhlss.................pphps.....p+hhLutp................ CONSENSUS/50% sDVslsVus.................ccacs.....HKslLusp................ S36018|S36018_1 -------SPYFNTLFVSHPEK--------------------------------------- CONSENSUS/80% .......s.hh.thh.tt.......................................... CONSENSUS/65% .......SshFpshhtsp..t....................................... CONSENSUS/50% .......SsaFcslFpsshppt...................................... S36018|S36018_1 ------------------------------------------------------------ CONSENSUS/80% ............................................................ CONSENSUS/65% ............................................................ CONSENSUS/50% ............................................................ S36018|S36018_1 ---------HPIVILKD--------VPYSDMKSLLDFMYRG-----EVSVDQE------- CONSENSUS/80% ............h.h.t........hp.t.ht.llphhhss.....ph............ CONSENSUS/65% .........tsth.h.c........hs.pshphlLpahYss.....pl.hspp....... CONSENSUS/50% ........tpsplplpD........lsscsFcslLsalYsu.....clplscp....... S36018|S36018_1 ----------------RLTAFLRVAESL-----RIKGLTEVNDDKPSPAA CONSENSUS/80% ................th.thht.uphh......h..hht.stt.h.t.. CONSENSUS/65% ................slptllphAphh.....plttlhphspphhhpth CONSENSUS/50% ................slpslLctAcha.....plsslhcpCpptltppp
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |