4896.SPCC1223.13-1_from_631_to_825MSIRHGDCVCLFNRYRAQHNNALFLGTSNVQRAISKVSLNMKYNSNYFPTTDAPNDAENE CONSENSUS/80% hsI.sGo.VuLFNRh+SQTlpT+Yhplpts.............................. CONSENSUS/65% lCIsSGopVuLFNRlRSQTVsTRYLpV-ss.............................. CONSENSUS/50% LCIuSGSpVuLFNRLRSQTVSTRYLsVEsu.............................. 4896.SPCC1223.13-1_from_631_to_825GAGLAMANNLWEPFYIFSV---DELNKGNNSNPSDSRSKV------------------LC CONSENSUS/80% ..thhusstpWssFtl.l......t......t...hptsh..................lh CONSENSUS/65% ..sFpASuspWuuFsIaL.....sc.s.pptsphslp-Ga..................lp CONSENSUS/50% ..sFpASuspWuAFTIaLh...s--psps-ssshslR-Ga..................lp 4896.SPCC1223.13-1_from_631_to_825SNMVIILVSKITGVQSPPL-----------------------------ILKKHDNWKVSL CONSENSUS/80% YGshV.Lss..TGhs.P.h.............................hlRKVspt.s.l CONSENSUS/65% YGSsVpLVsssTGhuhP.L.............................lIRKVDKppshL CONSENSUS/50% YGSlVpLVsoVTGlALPPL.............................lIRKVDKQpshL 4896.SPCC1223.13-1_from_631_to_825SSRAPSE----------------------AINCLSK-LAFQCHE-------------TKR CONSENSUS/80% s.....p......................sloQlp+.hAh.h....h..........ph. CONSENSUS/65% ss...p-......................PVSQLHK.sAaph....hss........sth CONSENSUS/50% -s...-E......................PVSQLHK.CAFQh....pss........s+t 4896.SPCC1223.13-1_from_631_to_825FL-----YIDEKQSS--------------------------------------------- CONSENSUS/80% aLsh..ttl..h................................................ CONSENSUS/65% YLshst-clhpapup............................................. CONSENSUS/50% YLslSp-+IlpapAs............................................. 4896.SPCC1223.13-1_from_631_to_825-----------------------------------------EISFTSGELEYSDPNDPTK CONSENSUS/80% .......................................................spp.p CONSENSUS/65% ......................................................sscpts CONSENSUS/50% .....................................................ssscsss 4896.SPCC1223.13-1_from_631_to_825ATHSVLPWSAMW CONSENSUS/80% .....h..uuth CONSENSUS/65% h....lscGusW CONSENSUS/50% tp...lsDGAsW
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |