342451.SSP0105_from_721_to_990NISVGNKYAYSFDKKQ-GCLKSVLHNNE----IIFNNNT------ETKIWRAPIDND--- CONSENSUS/80% tl.tttthth.hshtp.Ghl.ph..tsp....thl.ts.........phaRs.hDND... CONSENSUS/65% tl.pusphph.Fs+pp.GhlsshphsGp....phltps.......p.saaRAsTDNDht. CONSENSUS/50% sl.pusshphpFs+ps.GsLsSaphsGc....chlpcsh......pssFWRAPTDNDhGs 342451.SSP0105_from_721_to_990----------------------AYIKKEWLYS----GYNNIQTLVTNYKIIEDE------ CONSENSUS/80% .........................ht.Whts....sh..h..ph...t..t.t...... CONSENSUS/65% ......................thhhthWptu....uhpthhtphp.hp.tppt...... CONSENSUS/50% ......................stttstW+sA....Ghpphppclpshp.psps...... 342451.SSP0105_from_721_to_990--------------------SNISLVFEIN----IESEAVPPVLKGSLTWT-VYQD-GKV CONSENSUS/80% ........................lthth.....h.s......h.hth.Yp.l.tp.Gtl CONSENSUS/65% ......................h.lpspht....hss...ththphphpYp.ltss.Gpl CONSENSUS/50% ......................ltlsspap....lss...shshpsshsYs.lsss.Gpl 342451.SSP0105_from_721_to_990NVDYNLE---------------------KDNN-------APFLPRFGLLITLPSTY---- CONSENSUS/80% plphph........................tt..........hs+hGhph.hstth.... CONSENSUS/65% plphphp.....................ssps.......hs.lPRlGhphtlstph.... CONSENSUS/50% cVssshp.....................ssss.......lssLPRlGlphpLsssh.... 342451.SSP0105_from_721_to_990EQINYYGNGPMSSYQDKGIATYLDMFET-TVTNNGD-VHIKPQEAGSHNQTTIMNIT--- CONSENSUS/80% pphpahGhGPtEsY.D+ptushhuhap..shtp.hh..Y.hPQ-sG.+.ps+.htlt... CONSENSUS/65% pplpaaGtGPtEsYsDRppushlGhaps.slpc.at.sYlhPQEsGs+p-sRalpls... CONSENSUS/50% cplcaaGRGPpENYsDRcpuuplGhYps.slc-has.sYlpPQENGsRsDlRWlsLs... 342451.SSP0105_from_721_to_990-------NNE-HTLTI--------------------TSEDTF-----SFNASHYSLNQLT CONSENSUS/80% .......p.t..uh.h......................t..h.....thsh..as.tplt CONSENSUS/65% .......stpspGlhh....................tsttsh.....saush.aotppLp CONSENSUS/50% .......spsGpGLtl....................pusssF.....sFSshpYosccL- 342451.SSP0105_from_721_to_990E--------------------------------AKHVDELEI--ENNT-YLYVDYAQSGI CONSENSUS/80% t................................tpH..-l....tt.h.hlplDhh.hGl CONSENSUS/65% p................................spH.t-Lt...pshs.hlplDttphGl CONSENSUS/50% p................................ApHss-Lpp..cctl.sLslDstQtGV 342451.SSP0105_from_721_to_990GS-NSCG--PELNEEY--RLNNK-KITFNFDLN CONSENSUS/80% Gs.sShu..s.s..pa..hl..p.thpath.ht CONSENSUS/65% Gu.sShG..sssh.pY..pl.sp.papasaplp CONSENSUS/50% GG.sSWG..ssVpscY..plsss.capauFsLp
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |