205921.SAK_2089_from_15_to_109EIDFYLDRN-RN-IFVTIEQLAQGFGY---------KSRNA------------------- CONSENSUS/80% tlchh...p.sp..aFss.DlsphLsh.........pspph................... CONSENSUS/65% plRsl..hs.sc..aFsutDlsphLuh........tsspps................... CONSENSUS/50% plRsl.shc.uE.sWFlusDVAcsLGa........sssccA................... 205921.SAK_2089_from_15_to_109---------IEK-----MIERQPYLKEKR---FSVTDKLSATDGKQYE------------ CONSENSUS/80% .........h.......hptpth.....t..............st.pp............ CONSENSUS/65% .........hpp.....lcpcpp...thp....hts.......uttpp............ CONSENSUS/50% .........lpc.....lcccc+..tspp...hhss.......Guppc............ 205921.SAK_2089_from_15_to_109-TRLFNKRGIFEIGMLSKTE--------KGKIFRQWIYDHIEE CONSENSUS/80% .h.hhsptshatllhtsp.s.........uctFcpWlhp.lh. CONSENSUS/65% .hhhlsEsGlYpLlhpu+ps........pAcpF+cWVtppVlP CONSENSUS/50% .spllsEuGLYpLIhpS+pP........pA+cF++WVscEVLP
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |