C1QC_HUMAN/1-1 RYKQKFQSVFTVTRQ-THQPPA----PNSLIRFNAVLTNPQGDYDTSTGKFTCKVPGLYY CONSENSUS/80% phttt.psAFoshhp.....P......s.slhFspllhN.ptpapspoGhFpC.hPGlYh CONSENSUS/65% phpsp.psAFosthp..tt.Ps.....stslhFscllhNtpspYsspTGpFsCslPGlYa CONSENSUS/50% chssps+SAFoVpto..pshPs....supPVhFccVLaNtpucYcssTG+FoCsVPGlYY C1QC_HUMAN/1-1 FVYHASHTA---NLCVLLYRS---GVKVVTFCGHTSKT-NQVNSGGVLLRLQVGEEVWLA CONSENSUS/80% Fsaplp.h.t..tlhs.Lhhst..hh.....hpt..ps.hp.soGusllpLp.GDpVWLp CONSENSUS/65% Fsaalpshtp..slpltLhpssh.shh...tp-phtps.hc.sSGuslLpLp.GDpVWLp CONSENSUS/50% FuYHlpspss..slpVuLh+Nshplht...ppDptpcshh-sASGuslLpLppGDcVWLc C1QC_HUMAN/1-1 VND---YYDMVGIQGSDSVFSGFLLFPD CONSENSUS/80% h......st..th..sposFSGFLlas. CONSENSUS/65% hss..ttsshhtsphspSsFSGFLlaPs CONSENSUS/50% sss..ptsulhuuptscSsFSGFLLaPs
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |