IMMENSIN/758-85 QLITTLGDQ-----VVTLDGT----PTELNLG--SSLFSDVD------NDTLSYSLTING CONSENSUS/80% hh.sthss........h..st.....aphtls. ss.FsDss. ...ssslohsssh.s CONSENSUS/65% slssslsst......ssspss....sFshpls. ussFoDsD. ...uDsLTaoAohhs CONSENSUS/50% slssslu-p......ssspss....sFsasls. ossFoDsD. ...GDoLTYSATLss IMMENSIN/758-85 ---SANL---PSWMSF-DSG----TGILTG-TPASGD------EAVHTVVVSASDGS--- CONSENSUS/80% ...sssL...ssWltF.sut....sthh.G.sPsssp......hsthtltlsAoD.ts.. CONSENSUS/65% ...GssL...PSWLsF.Dus....otohoG.oPsssc......sGshslclTATDssG.. CONSENSUS/50% ...GuuL...PSWLoF.Dus....TtTFoG.TPosuD......lGslsl+VTATDsuG.. IMMENSIN/758-85 ------LSASAQFTMSVKAANNVP CONSENSUS/80% .......pssp.htlsl.ssspss CONSENSUS/65% ......tosossFslsVtssNsuP CONSENSUS/50% ......sosScsFslsVsssN-AP
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |