Q9VCU4/70-394 TLPDMDLIINTRDYPQLNAAWGNAAG---------------------GPVFSFSKTKEYR CONSENSUS/80% tlPDl-hhhsstDhP.lpttthtt.......................sPlFpastspthh CONSENSUS/65% plPDl-hhhsscDhPhlptpshpsht.....................sPlFpaCssctth CONSENSUS/50% clPDlELhFsscDaPll+ucsasuhpps.................sPsPLFSYCusccal Q9VCU4/70-394 DIMYPAWTFWAGGPATK-LHPRGIGR-WDQMREKLEKRA------AAIPWSQKRSLGFFR CONSENSUS/80% DIhhPsasaW........ua.cssh+.hs...hthptts.. .tth.W.p+pshuaW+ CONSENSUS/65% DIlaPsWoaW........Gascssh+.Wsp.hhplcpts.. .pthpWps+pshuaW+ CONSENSUS/50% DIVFPDWSFWs.......GWsElNlR.W-ppppclccus.. .pcscWp-KsuhAYWR Q9VCU4/70-394 GSRTSD------------ERDSLILLSRRNPELVEAQYTKNQGW---------------- CONSENSUS/80% Gs.sss............pR.pLhphs.p....htsplhhtsh................. CONSENSUS/65% Gsssss............pRtsLh+hshpt...hpsplhhpsh................. CONSENSUS/50% GNsoVus...........pRc-LlKCNpSs.csssA+lhcQDa................. Q9VCU4/70-394 ------------------KSPKDTLDAPAADE-VSFEDHCKYKYLFNFRGVAASFRLKHL CONSENSUS/80% .......................ptpt.thpp..shtppppa+YhI.h-GhuhShp.pal CONSENSUS/65% .......................pppt.shcp..sht-psp++YhI.I-GhAhShph+al CONSENSUS/50% ...................t..sccccsGacc.ssLE-QC+HKYKIYIEGhAWSVRLKYI Q9VCU4/70-394 FLCKSLVFHVGD-------EWQEFFYDQLKPWVHYVPLKSYPSQQEYEHILSFFKKNDAL CONSENSUS/80% hhscShsLhlps........a.-FF.ctL.Ph.HYhPlpsp.ps..lh.hlpahpppspt CONSENSUS/65% LsCcShsLhlps........ah-FFsctLhPh.HYhPl+sp.pstplt.tlpWhpppspp CONSENSUS/50% LuCDSlTLhV+s.......pYaDFFoRsLpPapHYWPIKScscCpsLKaAVcWuNsHscc Q9VCU4/70-394 AQEIAQRGYDFIWEHLRMKDIKCYWRKLLKRYVKLLQYE CONSENSUS/80% ApcIuppuppah.p.Lphc.lhsYhhcLhptYuKLhp.c CONSENSUS/65% ApcIuccupcFhpppLpMcplaDYhh+LhptYuKLhphc CONSENSUS/50% Ap-IG+cGp-FlppcLcM-cVYDYMF+LLpcYuKLL+aK
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |