HS13021_1 MHPHHQETLKKNRVVLAKQLLLS---ELLEHLLEKDIITLEMRELIQAKVGSFSQ--NVE CONSENSUS/80% hpt.t.phhcpthhthhp.h.hp....lLp.Lhtptlhs.p..-hhpthsst.cc..hh. CONSENSUS/65% Mpt.ppphlc+pphplhpplths...tlL-hLhtcslls.pph-hlpthsst.cc..sht CONSENSUS/50% Msspcpcsl++s+lcLscpLtl-...plL-sLlp+slLspccpEtIpptssspcc..sRp HS13021_1 LLNLLPKRGPQAFDAFCEALRE--TKQGHLEDMLLT CONSENSUS/80% hl..l.p+ts.th.hhhp.hpp....pthl.phh.. CONSENSUS/65% hlptl.p+ustshthhhpshpp....pphLsphh.. CONSENSUS/50% Llcslpc+GspAhssalcsLpc...scspLschLts
The grouping of amino acids to classes and class abbreviation (the key) used within consensus sequences are shown below:
| Class | Key | Residues |
|---|---|---|
| alcohol | o | S,T |
| aliphatic | l | I,L,V |
| any | . | A,C,D,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,V,W,Y |
| aromatic | a | F,H,W,Y |
| charged | c | D,E,H,K,R |
| hydrophobic | h | A,C,F,G,H,I,K,L,M,R,T,V,W,Y |
| negative | - | D,E |
| polar | p | C,D,E,H,K,N,Q,R,S,T |
| positive | + | H,K,R |
| small | s | A,C,D,G,N,P,S,T,V |
| tiny | u | A,G,S |
| turnlike | t | A,C,D,E,G,H,K,N,Q,R,S,T |